Evidence map›Paper›PMID 23451886›Full record

ReviewAnnual review of biophysics2013

Influences of membrane mimetic environments on membrane protein structures.

Huan-Xiang Zhou, Timothy A Cross

Abstract readReview
In one paragraph

Review in Annual review of biophysics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 159 papers.

0numbers the graph read from it
0cells of the map it votes in
159citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

159 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. bioRxiv : the preprint server for biology · 2025
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Journal of the American Chemical Society · 2025
    Article
  12. Membrane-assisted Aβ40 aggregation pathways.Cell reports. Physical science · 2025
    Article
  13. Review
  14. Article
  15. bioRxiv : the preprint server for biology · 2025
    Article
  16. Article
  17. Membrane-assisted Aβ40 aggregation pathways.bioRxiv : the preprint server for biology · 2024
    Article
  18. Article
  19. Article
  20. Modeling membrane geometries implicitly in Rosetta.Protein science : a publication of the Protein Society · 2024
    Article

99 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Huan-Xiang ZhouInstitute of Molecular Biophysic, Florida State University, Tallahassee, USA.
Timothy A Cross

Funding

Target IdentificationP01AI074805 · NIAID · FLORIDA STATE UNIVERSITY · PI CROSS, TIMOTHY A · 2009 to 2013
$8.7M
DYNAMIC AND STRUCTURAL ELUCIDATION OF GRAMICIDIN A'R01AI023007 · NIAID · FLORIDA STATE UNIVERSITY · PI CROSS, TIMOTHY A · 1987 to 2014
$5.1M
Four Mtb Membrane Proteins: Structure and FunctionR01AI073891 · NIAID · FLORIDA STATE UNIVERSITY · PI CROSS, TIMOTHY A · 2008 to 2012
$2.0M
Modeling Crowding and Confinement of Cellular EnvironmentsR01GM088187 · NIGMS · FLORIDA STATE UNIVERSITY · PI ZHOU, HUAN-XIANG · 2010 to 2015
$1.6M
NIAID NIH HHS AI-023007NIAID NIH HHS AI-073891NIAID NIH HHS AI-074805NIAID NIH HHS P01 AI074805NIAID NIH HHS R01 AI023007NIAID NIH HHS R01 AI073891NIGMS NIH HHS GM-088187NIGMS NIH HHS R01 GM088187
6 · The paper itself

Abstract

The number of membrane protein structures in the Protein Data Bank is becoming significant and growing. Here, the transmembrane domain structures of the helical membrane proteins are evaluated to assess the influences of the membrane mimetic environments. Toward this goal, many of the biophysical properties of membranes are discussed and contrasted with those of the membrane mimetics commonly used for structure determination. Although the mimetic environments can perturb the protein structures to an extent that potentially gives rise to misinterpretation of functional mechanisms, there are also many structures that have a native-like appearance. From this assessment, an initial set of guidelines is proposed for distinguishing native-like from nonnative-like membrane protein structures. With experimental techniques for validation and computational methods for refinement and quality assessment and enhancement, there are good prospects for achieving native-like structures for these very important proteins.

Indexed as

Protein Structure, TertiaryAnimalsDatabases, ProteinHumansLipid BilayersMembrane ProteinsModels, MolecularProtein Structure, SecondaryLipid BilayersMembrane Proteins

Identifiers

PMID23451886
PMCPMC3731949

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.