Evidence map›Paper›PMID 23451206›Full record

ArticlePloS one2013

Genome wide mapping reveals PDE4B as an IL-2 induced STAT5 target gene in activated human PBMCs and lymphoid cancer cells.

Zsuzsanna S Nagy, Jeremy A Ross, Georgialina Rodriguez, Balint L Balint, Lajos Szeles, Laszlo Nagy, Robert A Kirken

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. PDE4 subtypes in cancer.Oncogene · 2020
    Review
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Zsuzsanna S NagyDepartment of Biological Sciences, University of Texas at El Paso, El Paso, Texas, United States of America. nagyzsu@med.unideb.hu
Jeremy A Ross
Georgialina Rodriguez
Balint L Balint
Lajos Szeles
Laszlo Nagy
Robert A Kirken
University of Debrecen · HUThe University of Texas at El Paso · US

Funding

TOXICOLOGY PROJECTG12RR008124 · NCRR · UNIVERSITY OF TEXAS EL PASO · PI WALSH, ELIZABETH J · 1992 to 2011
$20.8M
UTEP SCORE InstrumentationS06GM008012 · NIGMS · UNIVERSITY OF TEXAS EL PASO · PI ALMEIDA, IGOR C · 1989 to 2010
$15.8M
T-cell growth factor pathways and immune modulationR01AI053566 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI KIRKEN, ROBERT · 2003 to 2007
$1.2M
NCRR NIH HHS 5G12RR008124NCRR NIH HHS G12 RR008124NIAID NIH HHS AI053566NIAID NIH HHS R01 AI053566NIGMS NIH HHS S06 GM008012NIGMS NIH HHS S06 GM008012-37
6 · The paper itself

Abstract

IL-2 is the primary growth factor for promoting survival and proliferation of activated T cells that occurs following engagement of the Janus Kinase (JAK)1-3/and Signal Transducer and Activator of Transcription (STAT) 5 signaling pathway. STAT5 has two isoforms: STAT5A and STAT5B (commonly referred to as STAT5) which, in T cells, play redundant roles transcribing cell cycle and survival genes. As such, inhibition of STAT5 by a variety of mechanisms can rapidly induce apoptosis in certain lymphoid tumor cells, suggesting that it and its target genes represent therapeutic targets to control certain lymphoid diseases. To search for these molecules we aligned IL-2 regulated genes detected by Affymetrix gene expression microarrays with the STAT5 cistrome identified by chip-on-ChIP analysis in an IL-2-dependent human leukemia cell line, Kit225. Select overlapping genes were then validated using qRT(2)PCR medium-throughput arrays in human PHA-activated PBMCs. Of 19 putative genes, one key regulator of T cell receptor signaling, PDE4B, was identified as a novel target, which was readily up-regulated at the protein level (3 h) in IL-2 stimulated, activated human PBMCs. Surprisingly, only purified CD8+ primary T-cells expressed PDE4B, but not CD4+ cells. Moreover, PDE4B was found to be highly expressed in CD4+ lymphoid cancer cells, which suggests that it may represent a physiological role unique to the CD8+ and lymphoid cancer cells and thus might represent a target for pharmaceutical intervention for certain lymphoid diseases.

Indexed as

Cell Line, TumorCyclic Nucleotide Phosphodiesterases, Type 4Gene Expression ProfilingHumansInterleukin-2LymphomaMonocytesPolymerase Chain ReactionSTAT5 Transcription FactorCyclic Nucleotide Phosphodiesterases, Type 4Interleukin-2STAT5 Transcription Factor

Identifiers

PMID23451206
PMCPMC3581501
OpenAlexW2073057988

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.