Evidence map›Paper›PMID 23451113›Full record

ArticlePloS one2013

DNA methylation dynamics in blood after hematopoietic cell transplant.

Ramon M Rodriguez, Beatriz Suarez-Alvarez, Rubén Salvanés, Manuel Muro, Pablo Martínez-Camblor, Enrique Colado, Miguel Alcoceba Sánchez, Marcos González Díaz, Agustin F Fernandez, Mario F Fraga and 1 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Increased fetal microchimerism in immune and stem cell subsets in preeclampsia.American journal of reproductive immunology (New York, N.Y. : 1989) · 2023
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Transplant genetics and genomics.Nature reviews. Genetics · 2017
    Review
  13. Review
  14. Article
  15. Review
  16. Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Ramon M RodriguezCancer Epigenetics Laboratory, Instituto Universitario de Oncología del Principado de Asturias, HUCA, Universidad de Oviedo, Oviedo, Spain.
Beatriz Suarez-Alvarez
Rubén Salvanés
Manuel Muro
Pablo Martínez-Camblor
Enrique Colado
Miguel Alcoceba Sánchez
Marcos González Díaz
Agustin F Fernandez
Mario F Fraga
Carlos Lopez-Larrea
Hospital Universitario Central de Asturias · ESUniversidad de Oviedo · ESComplejo Hospitalario de Salamanca · ESHospital Universitario Virgen de la Arrixaca · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epigenetic deregulation is considered a common hallmark of cancer. Nevertheless, recent publications have demonstrated its association with a large array of human diseases. Here, we explore the DNA methylation dynamics in blood samples during hematopoietic cell transplant and how they are affected by pathophysiological events during transplant evolution. We analyzed global DNA methylation in a cohort of 47 patients with allogenic transplant up to 12 months post-transplant. Recipients stably maintained the donor's global methylation levels after transplant. Nonetheless, global methylation is affected by chimerism status. Methylation analysis of promoters revealed that methylation in more than 200 genes is altered 1 month post-transplant when compared with non-pathological methylation levels in the donor. This number decreased by 6 months post-transplant. Finally, we analyzed methylation in IFN-γ, FASL, IL-10, and PRF1 and found association with the severity of the acute graft-versus-host disease. Our results provide strong evidence that methylation changes in blood are linked to underlying physiological events and demonstrate that DNA methylation analysis is a viable strategy for the study of transplantation and for development of biomarkers.

Indexed as

Hematopoietic Stem Cell TransplantationAdolescentAdultChildChild, PreschoolDNA MethylationFas Ligand ProteinFemaleHumansInfantInfant, NewbornInterferon-gammaInterleukin-10MaleMiddle AgedPerforinFASLG protein, humanFas Ligand ProteinInterferon-gammaInterleukin-10PerforinPore Forming Cytotoxic ProteinsPRF1 protein, human

Identifiers

PMID23451113
PMCPMC3579934
OpenAlexW2068720192

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.