Evidence map›Paper›PMID 23449991›Full record

ArticleG3 (Bethesda, Md.)2013

The genetic architecture of degenerin/epithelial sodium channels in Drosophila.

Kathleen M Zelle, Beika Lu, Sarah C Pyfrom, Yehuda Ben-Shahar

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 96 citations in OpenAlex.

  1. Article
  2. A single-nucleus transcriptomic atlas of the adultbioRxiv : the preprint server for biology · 2025
    Article
  3. Article
  4. The Drosophila DEG/ENaC PPK12 is a NaScientific reports · 2025
    Article
  5. Article
  6. Multiple mechanisms of action of an extremely painful venom.bioRxiv : the preprint server for biology · 2024
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Review
  13. Regulation ofiScience · 2022
    Article
  14. Genomic architecture and functional unit of mimicry supergene in female limited Batesian mimicPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Review
  15. Article
  16. Review
  17. Evolution of the Insect PPK Gene Family.Genome biology and evolution · 2021
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kathleen M ZelleDepartment of Biology, Washington University in St. Louis, St. Louis, Missouri 63130, USA.
Beika Lu
Sarah C Pyfrom
Yehuda Ben-Shahar
Washington University in St. Louis · US

Funding

TRAINING PROGRAM IN CELLULAR AND MOLECULAR BIOLOGYT32GM007067 · NIGMS · WASHINGTON UNIVERSITY · PI TRUE-KROB, HEATHER L · 1985 to 2020
$20.4M
CHEMOSENSORY ROLES FOR EPITHELIAL SODIUM CHANNELSR03DC010244 · NIDCD · WASHINGTON UNIVERSITY · PI BEN-SHAHAR, YEHUDA · 2009 to 2011
$448k
NIDCD NIH HHS R03 DC010244NIGMS NIH HHS T32 GM007067
6 · The paper itself

Abstract

Degenerin/epithelial sodium channels (DEG/ENaC) represent a large family of animal-specific membrane proteins. Although the physiological functions of most family members are not known, some have been shown to act as nonvoltage gated, amiloride-sensitive sodium channels. The DEG/ENaC family is exceptionally large in genomes of Drosophila species relative to vertebrates and other insects. To elucidate the evolutionary history of the DEG/ENaC family in Drosophila, we took advantage of the genomic and genetic information available for 12 Drosophila species that represent all the major species groups in the Drosophila clade. We have identified 31 family members (termed pickpocket genes) in Drosophila melanogaster, which can be divided into six subfamilies, which are represented in all 12 species. Structure prediction analyses suggested that some subunits evolved unique structural features in the large extracellular domain, possibly supporting mechanosensory functions. This finding is further supported by experimental data that show that both ppk1 and ppk26 are expressed in multidendritic neurons, which can sense mechanical nociceptive stimuli in larvae. We also identified representative genes from five of the six DEG/ENaC subfamilies in a mosquito genome, suggesting that the core DEG/ENaC subfamilies were already present early in the dipteran radiation. Spatial and temporal analyses of expression patterns of the various pickpocket genes indicated that paralogous genes often show very different expression patterns, possibly indicating that gene duplication events have led to new physiological or cellular functions rather than redundancy. In summary, our analyses support a rapid early diversification of the DEG/ENaC family in Diptera followed by physiological and/or cellular specialization. Some members of the family may have diversified to support the physiological functions of a yet unknown class of ligands.

Indexed as

Genome, InsectAmino Acid SequenceAnimalsCulicidaeDegenerin Sodium ChannelsDrosophila melanogasterDrosophila ProteinsEpithelial Sodium ChannelsEvolution, MolecularGene DuplicationGene Expression ProfilingGenetic VariationLarvaMechanotransduction, CellularMembrane ProteinsMolecular Sequence DataDegenerin Sodium ChannelsDrosophila ProteinsEpithelial Sodium ChannelsMembrane Proteinsppk protein, DrosophilaSodium ChannelschemosensationDegenerin/epithelial sodium channelfruit flymechanosensationphylogeny

Identifiers

PMID23449991
PMCPMC3583452
OpenAlexW1999739739

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.