Evidence map›Paper›PMID 23449473›Full record

ArticleDevelopmental cell2013

Control of hematopoietic stem cell emergence by antagonistic functions of ribosomal protein paralogs.

Yong Zhang, Anne-Cécile E Duc, Shuyun Rao, Xiao-Li Sun, Alison N Bilbee, Michele Rhodes, Qin Li, Dietmar J Kappes, Jennifer Rhodes, David L Wiest

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 99 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Ribosomal protein paralogues in ribosome specialization.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
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  13. Zebrafish: A Tractable Model for Analysis of T Cell Development.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Regulation of ribosomal protein genes: An ordered anarchy.Wiley interdisciplinary reviews. RNA · 2021
    Review

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Yong ZhangBlood Cell Development and Cancer Keystone, Immune Cell Development and Host Defense Program, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Anne-Cécile E Duc
Shuyun Rao
Xiao-Li Sun
Alison N Bilbee
Michele Rhodes
Qin Li
Dietmar J Kappes
Jennifer Rhodes
David L Wiest
Fox Chase Cancer Center · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Margaret von Mehren · 1985 to 2026
$138.8M
TRANSGENIC AND CHIMERIC MOUSE COREP30DK050306 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI Ken Hashigiwa Cadwell · 1997 to 2026
$32.5M
Role of RPL22 in Thymocyte DevelopmentR01AI073920 · NIAID · RESEARCH INST OF FOX CHASE CAN CTR · PI WIEST, DAVID L. · 2007 to 2011
$2.1M
Control of Lineage Commitment in Developing ThymocytesR01CA153260 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI KAPPES, DIETMAR J · 2010 to 2014
$1.9M
Role of RPL22 in Thymocyte DevelopmentR56AI073920 · NIAID · RESEARCH INST OF FOX CHASE CAN CTR · PI WIEST, DAVID L. · 2012 to 2012
$446k
NCI NIH HHS P01CA06927NCI NIH HHS P30 CA006927NCI NIH HHS R01 CA153260NIAID NIH HHS AI073920NIAID NIH HHS AI081814NIAID NIH HHS R01 AI073920NIAID NIH HHS R56 AI073920NIDDK NIH HHS P30 DK050306NIDDK NIH HHS P30-DK-50306
6 · The paper itself

Abstract

It remains controversial whether the highly homologous ribosomal protein (RP) paralogs found in lower eukaryotes have distinct functions and this has not been explored in vertebrates. Here we demonstrate that despite ubiquitous expression, the RP paralogs, Rpl22 and Rpl22-like1 (Rpl22l1) play essential, distinct, and antagonistic roles in hematopoietic development. Knockdown of Rpl22 in zebrafish embryos selectively blocks the development of T lineage progenitors after they have seeded the thymus. In contrast, knockdown of the Rpl22 paralog, Rpl22l1, impairs the emergence of hematopoietic stem cells (HSC) in the aorta-gonad-mesonephros by abrogating Smad1 expression and the consequent induction of essential transcriptional regulator, Runx1. Indeed, despite the ability of both paralogs to bind smad1 RNA, Rpl22 and Rpl22l1 have opposing effects on Smad1 expression. Accordingly, circumstances that tip the balance of these paralogs in favor of Rpl22 (e.g., Rpl22l1 knockdown or Rpl22 overexpression) result in repression of Smad1 and blockade of HSC emergence.

Indexed as

Cell LineageGene Expression Regulation, DevelopmentalAnimalsBlotting, WesternCell DifferentiationCore Binding Factor Alpha 2 SubunitHematopoietic Stem CellsReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionRibosomal ProteinsRibosomesRNA, MessengerSmad1 ProteinThymus GlandT-LymphocytesZebrafishCore Binding Factor Alpha 2 SubunitRibosomal ProteinsRNA, MessengerSmad1 ProteinZebrafish Proteins

Identifiers

PMID23449473
PMCPMC3586312
OpenAlexW2059774715

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.