Evidence map›Paper›PMID 23441204›Full record

ArticlePloS one2013

The Deinococcus radiodurans DR1245 protein, a DdrB partner homologous to YbjN proteins and reminiscent of type III secretion system chaperones.

Cédric Norais, Pascale Servant, Claire Bouthier-de-la-Tour, Pierre-Damien Coureux, Solenne Ithurbide, Françoise Vannier, Philippe P Guerin, Charles L Dulberger, Kenneth A Satyshur, James L Keck and 3 more

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Apprehending the NADViruses · 2022
    Article
  7. Natural Transformation inFrontiers in microbiology · 2020
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Cédric NoraisDepartment of Biochemistry, University of Wisconsin College of Agriculture and Life Sciences, Madison, Wisconsin, United States of America.
Pascale Servant
Claire Bouthier-de-la-Tour
Pierre-Damien Coureux
Solenne Ithurbide
Françoise Vannier
Philippe P Guerin
Charles L Dulberger
Kenneth A Satyshur
James L Keck
Jean Armengaud
Michael M Cox
Suzanne Sommer

Funding

THE BIOCHEMISTRY OF GENETIC RECOMBINATION/RECA PROTEINR01GM032335 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI COX, MICHAEL M. · 1985 to 2014
$6.8M
Structure and Function of Bacterial RecQ ProteinR01GM068061 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI KECK, JAMES L · 2003 to 2011
$2.7M
Mechanisms and applications of recombinational DNA repairU01GM032335 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI COX, MICHAEL M. · 2015 to 2018
$1.7M
Double strand DNA break repair in D. radioduransR01GM067085 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI COX, MICHAEL M. · 2005 to 2008
$1.3M
NIGMS NIH HHS GM068061NIGMS NIH HHS GM32335NIGMS NIH HHS R01 GM032335NIGMS NIH HHS R01 GM067085NIGMS NIH HHS R01 GM068061NIGMS NIH HHS U01 GM032335
6 · The paper itself

Abstract

The bacterium Deinococcus radiodurans exhibits an extreme resistance to ionizing radiation. A small subset of Deinococcus genus-specific genes were shown to be up-regulated upon exposure to ionizing radiation and to play a role in genome reconstitution. These genes include an SSB-like protein called DdrB. Here, we identified a novel protein encoded by the dr1245 gene as an interacting partner of DdrB. A strain devoid of the DR1245 protein is impaired in growth, exhibiting a generation time approximately threefold that of the wild type strain while radioresistance is not affected. We determined the three-dimensional structure of DR1245, revealing a relationship with type III secretion system chaperones and YbjN family proteins. Thus, DR1245 may display some chaperone activity towards DdrB and possibly other substrates.

Indexed as

Bacterial Secretion SystemsAmino Acid SequenceBacterial ProteinsBase SequenceDeinococcusModels, MolecularMolecular ChaperonesMolecular Sequence DataMutationProtein BindingProtein ConformationRadiation ToleranceSequence AlignmentBacterial ProteinsBacterial Secretion SystemsMolecular Chaperones

Identifiers

PMID23441204
PMCPMC3575483

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.