Evidence map›Paper›PMID 23441105›Full record

ArticleSupramolecular chemistry2013

On the Rate of Boronate Ester Formation in ortho-Aminomethyl Functionalized Phenyl Boronic Acids.

Byron E Collins, Pedro Metola, Eric V Anslyn

Abstract read
In one paragraph

Article in Supramolecular chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 40 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Dynamic Bonds: Adaptable Timescales for Responsive Materials.Angewandte Chemie (International ed. in English) · 2022
    Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Adaptable Fast Relaxing Boronate-Based Hydrogels for Probing Cell-Matrix Interactions.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2018
    Article
  12. Article
  13. Article
  14. Assembly of synthetic Aβ miniamyloids on polyol templates.Beilstein journal of organic chemistry · 2015
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Byron E CollinsDepartment of Chemistry and Biochemistry, The University of Texas at Austin, 100 E. 24th St. A1590, Austin, Texas 78712, United States.
Pedro Metola
Eric V Anslyn
The University of Texas at Austin · US

Funding

Probing Catalysis by Hydrogen BondsR01GM065515 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI ANSLYN, ERIC V. · 2002 to 2012
$1.9M
NIGMS NIH HHS R01 GM065515
6 · The paper itself

Abstract

The role of the ortho-aminomethyl functional group in phenyl boronic acids for sugar complexation is a topic of debate. To decipher its effect on the kinetics of boronate ester formation, we first performed pseudo-first order kinetics analyses at five pH values up to 4 mM in fructose, revealing a first-order kinetic dependence upon fructose. Under these conditions, the reaction is in equilibrium and does not reach completion, but at 50 mM fructose saturation is achieved revealing zero-order dependence upon fructose. This indicates rate-determining creation of an intermediate prior to reaction with fructose, which we propose involves leaving group departure of inserted solvent. Further, the region of kinetics displaying zero-order dependence has a kinetic isotope effect (KIE) of 1.42, showing involvement of a proton transfer in the leaving group departure. The ratio of forward and reverse rate constants branching from the intermediate shows that fructose is several thousand times more nucleophilic than the solvent. Overall, the data supports a mechanism where the o-aminomethyl group lowers the pK(a) of the proximal boronic acid and acts as a general-acid (as an ammonium) to facilitate leaving group departure. Consequently, by microscopic reversibility the resulting amine must perform general-base catalysis to deliver fructose.

Identifiers

PMID23441105
PMCPMC3579571
OpenAlexW2024768627

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.