Evidence map›Paper›PMID 23440417›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2013

IRF7-dependent IFN-β production in response to RANKL promotes medullary thymic epithelial cell development.

Dennis C Otero, Darren P Baker, Michael David

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Sterile production of interferons in the thymus.Journal of immunology (Baltimore, Md. : 1950) · 2025
    Review
  9. The amalgam of naive CD4Immunity · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. The role of interferon in the thymus.Current opinion in immunology · 2023
    Review
  16. Article
  17. Article
  18. RNA Metabolism in T Lymphocytes.Immune network · 2022
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Dennis C OteroDivision of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA.
Darren P Baker
Michael David
Biogen (United States) · USMoores Cancer CenterUC San Diego Health System · US

Funding

Experimental Molecular Vaccines for SchistosomiasisR01AI071223 · NIAID · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI SIDDIQUI, AFZAL A · 2008 to 2012
$2.6M
Interferon actions and autoimmune disordersR01AI071233 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DAVID, MICHAEL · 2007 to 2010
$1.7M
ACTIVATION OF INTERFERON REGULATED GENESR01AI047182 · NIAID · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI DAVID, MICHAEL · 2000 to 2004
$1.5M
The IRF - type I interferon system in T cell-mediated immune toleranceR21AI105722 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DAVID, MICHAEL · 2013 to 2014
$404k
NIAID NIH HHS AI71223NIAID NIH HHS R01 AI047182NIAID NIH HHS R01 AI071223NIAID NIH HHS R01 AI071233NIAID NIH HHS R21 AI105722
6 · The paper itself

Abstract

The contributions of IFN regulatory factor (IRF) 3/7 and the type I IFNs IFN-α/β to the innate host defense have been extensively investigated; however, their role in thymic development is less clear. In this study, we show that mice lacking the type I IFN receptor IFN-α/β receptor (IFNAR) or the downstream transcription factor STAT1 harbor a significant reduction in self-Ag-presenting, autoimmune regulator (AIRE)(+) medullary thymic epithelial cells (mTECs). Constitutive IFNAR signaling occurs in the thymic medulla in the absence of infection or inflammation. Receptor activator for NF-κB (RANK) ligand stimulation results in IFN-β upregulation, which in turn inhibits RANK signaling and facilitates AIRE expression in mTECs. Finally, we find that IRF7 is required for thymic IFN-β induction, maintenance of thymic architecture, and mTEC differentiation. We conclude that spatially and temporally coordinated cross talks between the RANK ligand/RANK and IRF7/IFN-β/IFNAR/STAT1 pathways are essential for differentiation of AIRE(+) mTECs.

Indexed as

AIRE ProteinAnimalsEpithelial CellsInterferon-betaInterferon Regulatory Factor-7MiceMice, KnockoutRANK LigandReceptor Activator of Nuclear Factor-kappa BReceptor, Interferon alpha-betaSignal TransductionSTAT1 Transcription FactorStromal CellsThymus GlandTranscription FactorsUbiquitin-Conjugating EnzymesAIRE ProteinIfnar1 protein, mouseInterferon-betaInterferon Regulatory Factor-7RANK LigandReceptor Activator of Nuclear Factor-kappa BReceptor, Interferon alpha-betaSTAT1 Transcription FactorTranscription FactorsUbiquitin-Conjugating Enzymes

Identifiers

PMID23440417
PMCPMC3608802
OpenAlexW2141055235

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.