Evidence map›Paper›PMID 23437866›Full record

ArticleJournal of medicinal chemistry2013

Non-nucleoside inhibitors of BasE, an adenylating enzyme in the siderophore biosynthetic pathway of the opportunistic pathogen Acinetobacter baumannii.

João Neres, Curtis A Engelhart, Eric J Drake, Daniel J Wilson, Peng Fu, Helena I Boshoff, Clifton E Barry, Andrew M Gulick, Courtney C Aldrich

Abstract read
In one paragraph

Article in Journal of medicinal chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Structural Biology of Nonribosomal Peptide Synthetases.Methods in molecular biology (Clifton, N.J.) · 2016
    Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

João NeresCenter for Drug Design, Academic Health Center, University of Minnesota , Minneapolis, Minnesota 55455, USA.
Curtis A Engelhart
Eric J Drake
Daniel J Wilson
Peng Fu
Helena I Boshoff
Clifton E Barry
Andrew M Gulick
Courtney C Aldrich

Funding

Development Of New Chemotherapeutics For TuberculosisZIAAI000693 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI BARRY, CLIFTON · 2009 to 2025
$20.1M
Structures of Peptide Synthetases and Related EnzymesR01GM068440 · NIGMS · HAUPTMAN-WOODWARD MEDICAL RESEARCH INST · PI GULICK, ANDREW M · 2004 to 2013
$3.1M
Design of Antituberculosis Agents that Target Siderophore BiosynthesisR01AI070219 · NIAID · UNIVERSITY OF MINNESOTA · PI ALDRICH, COURTNEY C · 2006 to 2013
$2.2M
Intramural NIH HHSNIAID NIH HHS AI070219NIAID NIH HHS R01 AI070219NIGMS NIH HHS GM068440NIGMS NIH HHS R01 GM068440
6 · The paper itself

Abstract

Siderophores are small-molecule iron chelators produced by bacteria and other microorganisms for survival under iron limiting conditions such as found in a mammalian host. Siderophore biosynthesis is essential for the virulence of many important Gram-negative pathogens including Acinetobacter baumannii, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Escherichia coli. We performed high-throughput screening against BasE, which is involved in siderophore biosynthesis in A. baumannii, and identified 6-phenyl-1-(pyridin-4-ylmethyl)-1H-pyrazolo[3,4-b]pyridine-4-carboxylic acid 15. Herein we report the synthesis, biochemical, and microbiological evaluation of a systematic series of analogues of the HTS hit 15. Analogue 67 is the most potent analogue with a KD of 2 nM against BasE. Structural characterization of the inhibitors with BasE reveals that they bind in a unique orientation in the active site, occupying all three substrate binding sites, and thus can be considered as multisubstrate inhibitors. These results provide a foundation for future studies aimed at increasing both enzyme potency and antibacterial activity.

Indexed as

Acinetobacter baumanniiAnti-Bacterial AgentsEnzyme InhibitorsMicrobial Sensitivity TestsModels, MolecularProtein ConformationSiderophoresStructure-Activity RelationshipAnti-Bacterial AgentsEnzyme InhibitorsSiderophores

Identifiers

PMID23437866
PMCPMC3621123

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.