Evidence map›Paper›PMID 23437210›Full record

ArticlePloS one2013

Coordination of division and development influences complex multicellular behavior in Agrobacterium tumefaciens.

Jinwoo Kim, Jason E Heindl, Clay Fuqua

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
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  4. Plants (Basel, Switzerland) · 2024
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  18. TheMicrobiology (Reading, England) · 2017
    Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jinwoo KimDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Jason E Heindl
Clay Fuqua
Indiana University Bloomington · US

Funding

Synthesis and function of a unipolar expolysaccharide in AgrobacteriumR01GM080546 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI FUQUA, WILLIAM C · 2007 to 2011
$1.3M
Developmental Asymmetry in Agrobacterium tumefaciensF32GM100601 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI HEINDL, JASON EUGENE · 2012 to 2014
$135k
NIGMS NIH HHS 1 F32 GM100601-01A1NIGMS NIH HHS F32 GM100601NIGMS NIH HHS GM080546NIGMS NIH HHS R01 GM080546
6 · The paper itself

Abstract

The α-Proteobacterium Agrobacterium tumefaciens has proteins homologous to known regulators that govern cell division and development in Caulobacter crescentus, many of which are also conserved among diverse α-Proteobacteria. In light of recent work demonstrating similarity between the division cycle of C. crescentus and that of A. tumefaciens, the functional conservation for this presumptive control pathway was examined. In C. crescentus the CtrA response regulator serves as the master regulator of cell cycle progression and cell division. CtrA activity is controlled by an integrated pair of multi-component phosphorelays: PleC/DivJ-DivK and CckA-ChpT-CtrA. Although several of the conserved orthologues appear to be essential in A. tumefaciens, deletions in pleC or divK were isolated and resulted in cell division defects, diminished swimming motility, and a decrease in biofilm formation. A. tumefaciens also has two additional pleC/divJhomologue sensor kinases called pdhS1 and pdhS2, absent in C. crescentus. Deletion of pdhS1 phenocopied the ΔpleC and ΔdivK mutants. Cells lacking pdhS2 morphologically resembled wild-type bacteria, but were decreased in swimming motility and elevated for biofilm formation, suggesting that pdhS2 may serve to regulate the motile to non-motile switch in A. tumefaciens. Genetic analysis suggests that the PleC/DivJ-DivK and CckA-ChpT-CtrA phosphorelays in A. tumefaciens are vertically-integrated, as in C. crescentus. A gain-of-function mutation in CckA (Y674D) was identified as a spontaneous suppressor of the ΔpleC motility phenotype. Thus, although the core architecture of the A. tumefaciens pathway resembles that of C. crescentus there are specific differences including additional regulators, divergent pathway architecture, and distinct target functions.

Indexed as

Agrobacterium tumefaciensBacterial ProteinsCaulobacter crescentusCell CycleCell DivisionDNA-Binding ProteinsGene Expression Regulation, BacterialMetabolic Networks and PathwaysPhosphorylationProtein KinasesTranscription FactorsBacterial ProteinsCtrA protein, CaulobacterDivK protein, Caulobacter crescentusDNA-Binding ProteinsProtein KinasesTranscription Factors

Identifiers

PMID23437210
PMCPMC3577659
OpenAlexW2082366293

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.