ArticleBriefings in bioinformatics2013
The Rat Genome Database 2013--data, tools and users.
Article in Briefings in bioinformatics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
44 citing papers in PubMed.
- Genome-wide association study of leukotriene modifier response in asthma.The pharmacogenomics journal · 2016Trial
- Therapeutic potency of a developed optimized polyherbal formulation in ameliorating obesity induced inflammation and oxidative stress in Swiss albino mice by targeting PPARγ, insulin receptor and AMPK signalling pathway.Journal of computer-aided molecular design · 2025Article
- iSheep: an Integrated Resource for Sheep Genome, Variant and Phenotype.Frontiers in genetics · 2021Article
- HOPS-dependent endosomal fusion required for efficient cytosolic delivery of therapeutic peptides and small proteins.Proceedings of the National Academy of Sciences of the United States of America · 2019Article
- Article
- Long Evans rat spermatogonial lines are effective germline vectors for transgenic rat production.Transgenic research · 2017Article
- Gene ORGANizer: linking genes to the organs they affect.Nucleic acids research · 2017Article
- Positive Selection Linked with Generation of Novel Mammalian Dentition Patterns.Genome biology and evolution · 2016Article
- High Resolution Genomic Scans Reveal Genetic Architecture Controlling Alcohol Preference in Bidirectionally Selected Rat Model.PLoS genetics · 2016Article
- Rat eradication comes within a whisker! A case study of a failed project from the South Pacific.Royal Society open science · 2016Article
- Joint analysis of multiple phenotypes: summary of results and discussions from the Genetic Analysis Workshop 19.BMC genetics · 2016Article
- Integrating multiple genomic data: sparse representation based biomarker selection for blood pressure.BMC proceedings · 2016Article
- miRNA Nomenclature: A View Incorporating Genetic Origins, Biosynthetic Pathways, and Sequence Variants.Trends in genetics : TIG · 2015Review
- A functional module-based exploration between inflammation and cancer in esophagus.Scientific reports · 2015Article
- PsyGeNET: a knowledge platform on psychiatric disorders and their genes.Bioinformatics (Oxford, England) · 2015Article
- Genomic landscape of rat strain and substrain variation.BMC genomics · 2015Article
- Structural libraries of protein models for multiple species to understand evolution of the renin-angiotensin system.General and comparative endocrinology · 2015Article
- Development and characterization of a novel rat model of estrogen-induced mammary cancer.Endocrine-related cancer · 2015Article
- Rich annotation of DNA sequencing variants by leveraging the Ensembl Variant Effect Predictor with plugins.Briefings in bioinformatics · 2015Article
- Web resources for model organism studies.Genomics, proteomics & bioinformatics · 2015Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
13 authors.
Funding
Abstract
The Rat Genome Database (RGD) was started >10 years ago to provide a core genomic resource for rat researchers. Currently, RGD combines genetic, genomic, pathway, phenotype and strain information with a focus on disease. RGD users are provided with access to structured and curated data from the molecular level through the organismal level. Those users access RGD from all over the world. End users are not only rat researchers but also researchers working with mouse and human data. Translational research is supported by RGD's comparative genetics/genomics data in disease portals, in GBrowse, in VCMap and on gene report pages. The impact of RGD also goes beyond the traditional biomedical researcher, as the influence of RGD reaches bioinformaticians, tool developers and curators. Import of RGD data into other publicly available databases expands the influence of RGD to a larger set of end users than those who avail themselves of the RGD website. The value of RGD continues to grow as more types of data and more tools are added, while reaching more types of end users.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.