ArticlePlant molecular biology2013
Global identification of miRNAs and targets in Populus euphratica under salt stress.
Article in Plant molecular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.
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Who cites it
55 citing papers in PubMed, 127 citations in OpenAlex.
- Integrated miRNA-seq and RNA-seq analysis reveals stage-specific miRNA-mRNA regulatory networks in Populus yunnanensis under salt stress.BMC genomics · 2026Article
- Rice and shine: a review of miRNA-mediated responses to abiotic stress inFrontiers in plant science · 2026Review
- idopNetwork Analysis of Salt-Responsive Transcriptomes Reveals Hub Regulatory Modules and Genes inInternational journal of molecular sciences · 2025Article
- Identification and Network Construction of mRNAs, miRNAs, lncRNAs, and circRNAs in Sweetpotato (International journal of molecular sciences · 2025Article
- Review
- The Intersection of Non-Coding RNAs Contributes to Forest Trees' Response to Abiotic Stress.International journal of molecular sciences · 2022Review
- Transcriptome Analysis ofInternational journal of molecular sciences · 2022Article
- Comparative Analysis of Salt Responsive MicroRNAs in Two Sweetpotato [Frontiers in plant science · 2022Article
- Integrated Full-Length Transcriptome and MicroRNA Sequencing Approaches Provide Insights Into Salt Tolerance in Mangrove (Frontiers in genetics · 2022Article
- Transcriptome Analysis of Arbuscular MycorrhizalMicroorganisms · 2021Article
- Genome-Wide Characterization of Salt-Responsive miRNAs, circRNAs and Associated ceRNA Networks in Tomatoes.International journal of molecular sciences · 2021Article
- Transcriptomic and epigenomic remodeling occurs during vascular cambium periodicity in Populus tomentosa.Horticulture research · 2021Article
- MicroRNAs in Woody Plants.Frontiers in plant science · 2021Review
- MicroRNA comparison between poplar and larch provides insight into the different mechanism of wood formation.Plant cell reports · 2020Article
- Widespread Exon Junction Complex Footprints in the RNA Degradome Mark mRNA Degradation before Steady State Translation.The Plant cell · 2020Article
- Mapping the Salt Stress-Induced Changes in the Root miRNome in Pokkali Rice.Biomolecules · 2020Article
- High-throughput deep sequencing reveals the important role that microRNAs play in the salt response in sweet potato (Ipomoea batatas L.).BMC genomics · 2020Article
- Characterization and expression profiles of miRNAs in the triploid hybrids of Brassica napus and Brassica rapa.BMC genomics · 2019Article
- Regulation mechanism of microRNA in plant response to abiotic stress and breeding.Molecular biology reports · 2019Review
- Conserved MicroRNA Act Boldly During Sprout Development and Quality Formation in Pingyang Tezaocha (Frontiers in genetics · 2019Article
Corrections and comments
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Authors and funding
6 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Populus euphratica, a typical hydro-halophyte, is ideal for studying salt stress responses in woody plants. MicroRNAs (miRNAs) are endogenous non-coding small RNAs that fulfilled an important post-transcriptional regulatory function. MiRNA may regulate tolerance to salt stress but this has not been widely studied in P. euphratica. In this investigation, the small RNAome, degradome and transcriptome were studied in salt stress treated P. euphratica by deep sequencing. Two hundred and eleven conserved miRNAs between Populus trichocarpa and P. euphratica have been found. In addition, 162 new miRNAs, belonging to 93 families, were identified in P. euphratica. Degradome sequencing experimentally verified 112 targets that belonged to 51 identified miRNAs, few of which were known previously in P. euphratica. Transcriptome profiling showed that expression of 15 miRNA-target pairs displayed reverse changing pattern under salt stress. Together, these results indicate that, in P. euphratica under salt stress, a large number of new miRNAs could be discovered, and both known and new miRNA were functionally cleaving to their target mRNA. Expression of miRNA and target were correspondingly induced by salt stress but that it was a complex process in P. euphratica.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.