Evidence map›Paper›PMID 23430038›Full record

ArticleChest2013

Heterogeneous pulmonary phenotypes associated with mutations in the thyroid transcription factor gene NKX2-1.

Aaron Hamvas, Robin R Deterding, Susan E Wert, Frances V White, Megan K Dishop, Danielle N Alfano, Ann C Halbower, Benjamin Planer, Mark J Stephan, Derek A Uchida and 6 more

Registry-linked trialOpen access · bronzeAbstract readComparative Study
In one paragraph

Article in Chest, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00014859 (Epidemiology of Surfactant Protein-B Deficiency), which is not on this map. Cited by 82 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed, 2 pooled it
6.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00014859 completednot on this map

Epidemiology of Surfactant Protein-B Deficiency

Typeobservational_patient_registrySponsorWashington University School of MedicineRan2001 to 2024Enrolled5,176ConditionsLung Diseases, Respiratory Distress Syndrome, Newborn, Pulmonary Surfactant, Lung Diseases, Interstitial
3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 2 syntheses or guidelines pooled it, 188 citations in OpenAlex.

  1. Pooled it
  2. Guideline
  3. Review
  4. Review
  5. Review
  6. Long isoforms of the COPD risk gene FAM13A orchestrate human lung epithelial development.American journal of respiratory cell and molecular biology · 2026
    Article
  7. Biallelic LAMP3 variants in 5 families with interstitial lung disease: Evidence of a disease-gene association.Genetics in medicine : official journal of the American College of Medical Genetics · 2026
    Article
  8. International Registry of NKX2-1-Related Disorders: Clinical, Genetic, and Imaging Perspectives.Movement disorders : official journal of the Movement Disorder Society · 2026
    Observational
  9. Article
  10. Article
  11. Review
  12. Interstitial lung disease in the newborn.Journal of perinatology : official journal of the California Perinatal Association · 2025
    Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. CRISPR-Cas9 Genome Editing Allows Generation of the Mouse Lung in a Rat.American journal of respiratory and critical care medicine · 2024
    Article
  18. Pathogenesis-driven treatment of primary pulmonary alveolar proteinosis.European respiratory review : an official journal of the European Respiratory Society · 2024
    Review
  19. Haploinsufficiency ofIntractable & rare diseases research · 2024
    Article
  20. Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 12 institutions in 1 country.

Aaron HamvasEdward Mallinckrodt Department of Pediatrics, Washington University, St. Louis, MO. Electronic address: hamvas@kids.wustl.edu.
Robin R DeterdingDepartment of Pediatrics, University of Colorado School of Medicine, Aurora, CO.
Susan E WertThe Perinatal Institute, Divisions of Neonatology, Perinatal and Pulmonary Biology, Cincinnati Children's Hospital Medical Center and the Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH.
Frances V WhiteLauren Ackerman Department of Pathology and Immunology, Washington University, St. Louis, MO.
Megan K DishopDepartment of Pathology and Laboratory Medicine, University of Colorado School of Medicine, Aurora, CO.
Danielle N AlfanoEdward Mallinckrodt Department of Pediatrics, Washington University, St. Louis, MO.
Ann C HalbowerDepartment of Pediatrics, University of Colorado School of Medicine, Aurora, CO.
Benjamin PlanerDepartment of Pediatrics, Hackensack University Medical Center, Hackensack, NJ.
Mark J StephanDepartment of Pediatrics, University of Washington, Seattle, WA.
Derek A UchidaDepartment of Pediatrics, University of Utah School of Medicine, Salt Lake City, UT.
Lee D WilliamesDepartment of Pediatrics, Madigan Healthcare System, Tacoma, WA.
Jill A RosenfeldSignature Genomic Laboratories, PerkinElmer, Inc, Spokane, WA.
Robert Roger LebelSection of Medical Genetics, Department of Pediatrics, SUNY Upstate Medical University, Syracuse, NY.
Lisa R YoungDepartments of Pediatrics and Medicine, Vanderbilt University, Nashville, TN.
F Sessions ColeEdward Mallinckrodt Department of Pediatrics, Washington University, St. Louis, MO.
Lawrence M NogeeDepartment of Pediatrics, Johns Hopkins University, Baltimore, MD.
Mallinckrodt (United States) · USUniversity of Colorado Denver · USHackensack University Medical Center · USJohns Hopkins University · USMadigan Army Medical Center · USPerkinElmer (United States) · USSUNY Upstate Medical University · USUniversity of Cincinnati · USUniversity of Utah · USUniversity of Washington · USVanderbilt University · USWashington University in St. Louis · US

Funding

EPIDEMIOLOGY OF SURFACTANT PROTEIN-B DEFICIENCYR01HL065174 · NHLBI · WASHINGTON UNIVERSITY · PI COLE, FRANCIS SESSIONS · 2001 to 2013
$9.3M
Genetic Regulation of Surfactant DeficiencyR01HL082747 · NHLBI · WASHINGTON UNIVERSITY · PI COLE, FRANCIS SESSIONS · 2007 to 2011
$3.5M
Surfactant protein gene mutations in lung diseaseR01HL054703 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI NOGEE, LAWRENCE M · 2001 to 2011
$2.4M
SP-B GENE MUTATIONS AND NEONATAL LUNG DISEASER29HL054703 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI NOGEE, LAWRENCE M · 1995 to 1999
–
NHLBI NIH HHS HL065174NHLBI NIH HHS HL082747NHLBI NIH HHS HL54703NHLBI NIH HHS R01 HL054703NHLBI NIH HHS R01 HL065174NHLBI NIH HHS R01 HL082747NHLBI NIH HHS R29 HL054703
6 · The paper itself

Abstract

backgroundMutations in the gene encoding thyroid transcription factor, NKX2-1, result in neurologic abnormalities, hypothyroidism, and neonatal respiratory distress syndrome (RDS) that together are known as the brain-thyroid-lung syndrome. To characterize the spectrum of associated pulmonary phenotypes, we identified individuals with mutations in NKX2-1 whose primary manifestation was respiratory disease.

methodsRetrospective and prospective approaches identified infants and children with unexplained diffuse lung disease for NKX2-1 sequencing. Histopathologic results and electron micrographs were assessed, and immunohistochemical analysis for surfactant-associated proteins was performed in a subset of 10 children for whom lung tissue was available.

resultsWe identified 16 individuals with heterozygous missense, nonsense, and frameshift mutations and five individuals with heterozygous, whole-gene deletions of NKX2-1. Neonatal RDS was the presenting pulmonary phenotype in 16 individuals (76%), interstitial lung disease in four (19%), and pulmonary fibrosis in one adult family member. Altogether, 12 individuals (57%) had the full triad of neurologic, thyroid, and respiratory manifestations, but five (24%) had only pulmonary symptoms at the time of presentation. Recurrent respiratory infections were a prominent feature in nine subjects. Lung histopathology demonstrated evidence of disrupted surfactant homeostasis in the majority of cases, and at least five cases had evidence of disrupted lung growth.

conclusionsPatients with mutations in NKX2-1 may present with pulmonary manifestations in the newborn period or during childhood when thyroid or neurologic abnormalities are not apparent. Surfactant dysfunction and, in more severe cases, disrupted lung development are likely mechanisms for the respiratory disease.

Indexed as

Genetic Predisposition to DiseaseMutationAdolescentAdultChildChild, PreschoolDNADNA Mutational AnalysisFemaleFollow-Up StudiesHumansImmunohistochemistryInfantInfant, NewbornLungLung DiseasesDNANuclear ProteinsThyroid Nuclear Factor 1Transcription Factors

Identifiers

PMID23430038
PMCPMC3760742
OpenAlexW2124124986

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.