Evidence map›Paper›PMID 23427147›Full record

ArticleHuman molecular genetics2013

Tardbpl splicing rescues motor neuron and axonal development in a mutant tardbp zebrafish.

Channa A A Hewamadduma, Andrew J Grierson, Taylur P Ma, Luyuan Pan, Cecilia B Moens, Philip W Ingham, Tennore Ramesh, Pamela J Shaw

Open access · hybridAbstract read
In one paragraph

Article in Human molecular genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Disease Modeling of Rare Neurological Disorders in Zebrafish.International journal of molecular sciences · 2022
    Review
  9. Zebrafish as a model organism for neurodegenerative disease.Frontiers in molecular neuroscience · 2022
    Review
  10. Article
  11. Review
  12. Article
  13. Illuminating ALS Motor Neurons With Optogenetics in Zebrafish.Frontiers in cell and developmental biology · 2021
    Review
  14. Article
  15. The Novel Small Molecule TRVA242 Stabilizes Neuromuscular Junction Defects in Multiple Animal Models of Amyotrophic Lateral Sclerosis.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Channa A A HewamaddumaDepartment of Neuroscience, Sheffield Institute for Translational Neuroscience, University of Sheffield, 385A, Glossop Road, Sheffield S10 2HQ, UK.
Andrew J Grierson
Taylur P Ma
Luyuan Pan
Cecilia B Moens
Philip W Ingham
Tennore Ramesh
Pamela J Shaw
University of Sheffield · GBFred Hutch Cancer Center · US

Funding

TILLING the Zebrafish Genome: A Reverse Genetic ApproachR01HG002995 · NHGRI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MOENS, CECILIA B, POSTLETHWAIT, JOHN H. · 2003 to 2010
$3.5M
TILLING the Zebrafish Genome: A Reverse Genetics ApproachR01HD076585 · NICHD · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MOENS, CECILIA B, SOLNICAKREZEL, LILIANNA · 2012 to 2014
$1.9M
Howard Hughes Medical InstituteMedical Research Council G0700091Motor Neurone Disease Association RAMESH/APR11/808-791NHGRI NIH HHS R01 HG002995NICHD NIH HHS R01 HD076585
6 · The paper itself

Abstract

Mutations in the transactive response DNA binding protein-43 (TARDBP/TDP-43) gene, which regulates transcription and splicing, causes a familial form of amyotrophic lateral sclerosis (ALS). Here, we characterize and report the first tardbp mutation in zebrafish, which introduces a premature stop codon (Y220X), eliminating expression of the Tardbp protein. Another TARDBP ortholog, tardbpl, in zebrafish is shown to encode a Tardbp-like protein which is truncated compared with Tardbp itself and lacks part of the C-terminal glycine-rich domain (GRD). Here, we show that tardbp mutation leads to the generation of a novel tardbpl splice form (tardbpl-FL) capable of making a full-length Tardbp protein (Tardbpl-FL), which compensates for the loss of Tardbp. This finding provides a novel in vivo model to study TDP-43-mediated splicing regulation. Additionally, we show that elimination of both zebrafish TARDBP orthologs results in a severe motor phenotype with shortened motor axons, locomotion defects and death at around 10 days post fertilization. The Tardbp/Tardbpl knockout model generated in this study provides an excellent in vivo system to study the role of the functional loss of Tardbp and its involvement in ALS pathogenesis.

Indexed as

RNA SplicingAmyotrophic Lateral SclerosisAnimalsAxonsDisease Models, AnimalDNA-Binding ProteinsFemaleGene Knockout TechniquesHumansMaleMotor NeuronsMutationZebrafishZebrafish ProteinsDNA-Binding ProteinsTardbp protein, zebrafishZebrafish Proteins

Identifiers

PMID23427147
PMCPMC3658164
OpenAlexW2126503719

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.