Evidence map›Paper›PMID 23424201›Full record

ArticleJournal of cell science2013

A pathway involving HDAC5, cFLIP and caspases regulates expression of the splicing regulator polypyrimidine tract binding protein in the heart.

Junmei Ye, Miriam Llorian, Maria Cardona, Anthony Rongvaux, Rana S Moubarak, Joan X Comella, Rhonda Bassel-Duby, Richard A Flavell, Eric N Olson, Christopher W J Smith and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of cell science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
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  4. PTBP1 as a potential regulator of disease.Molecular and cellular biochemistry · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Junmei YeDepartament de Ciències Mèdiques Bàsiques, Universitat de Lleida - IRBLLEIDA, Av Rovira Roure, 80, Lleida, 25198 Spain.
Miriam Llorian
Maria Cardona
Anthony Rongvaux
Rana S Moubarak
Joan X Comella
Rhonda Bassel-Duby
Richard A Flavell
Eric N Olson
Christopher W J Smith
Daniel Sanchis
Howard Hughes Medical Institute · USThe University of Texas Southwestern Medical Center · USUniversitat de Lleida · ESUniversity of Cambridge · GBVall d'Hebron Institut de Recerca · ES

Funding

Wellcome TrustWellcome Trust 092900
6 · The paper itself

Abstract

Polypyrimidine tract binding protein (PTB) regulates pre-mRNA splicing, having special relevance for determining gene expression in the differentiating muscle. We have previously shown that PTB protein abundance is progressively reduced during heart development without reduction of its own transcript. Simultaneous reduction of histone deacetylase (HDAC) expression prompted us to investigate the potential link between these events. HDAC5-deficient mice have reduced cardiac PTB protein abundance, and HDAC inhibition in myocytes causes a reduction in endogenous expression of cellular FLICE-like inhibitory protein (cFLIP) and caspase-dependent cleavage of PTB. In agreement with this, cardiac PTB expression is abnormally high in mice with cardiac-specific executioner caspase deficiency, and cFLIP overexpression prevents PTB cleavage in vitro. Caspase-dependent cleavage triggers further fragmentation of PTB, and these fragments accumulate in the presence of proteasome inhibitors. Experimental modification of the above processes in vivo and in vitro results in coherent changes in the alternative splicing of genes encoding tropomyosin-1 (TPM1), tropomyosin-2 (TPM2) and myocyte enhancer factor-2 (MEF2). Thus, we report a pathway connecting HDAC, cFLIP and caspases regulating the progressive disappearance of PTB, which enables the expression of the adult variants of proteins involved in the regulation of contraction and transcription during cardiac muscle development.

Indexed as

AnimalsBlotting, WesternCASP8 and FADD-Like Apoptosis Regulating ProteinCaspase 3Caspase 7CaspasesElectrophoresis, Polyacrylamide GelHistone DeacetylasesMiceMice, KnockoutMyocardiumPolypyrimidine Tract-Binding ProteinReverse Transcriptase Polymerase Chain ReactionTropomyosinCASP8 and FADD-Like Apoptosis Regulating ProteinCaspase 3Caspase 7CaspasesHdac5 protein, mouseHistone DeacetylasesPolypyrimidine Tract-Binding ProteinTpm1 protein, mouseTropomyosinCardiomyocyteDifferentiationGene expressionMyocyte Enhancer Factor-2Polypyrimidine tract binding protein

Identifiers

PMID23424201
PMCPMC3647441
OpenAlexW2129453500

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.