Evidence map›Paper›PMID 23422941›Full record

ArticleEuropean journal of human genetics : EJHG2013

The intellectual disability of trisomy 21: differences in gene expression in a case series of patients with lower and higher IQ.

André Mégarbané, Florian Noguier, Samantha Stora, Laurent Manchon, Clotilde Mircher, Roman Bruno, Nathalie Dorison, Fabien Pierrat, Marie-Odile Rethoré, Bernadette Trentin and 4 more

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In one paragraph

Article in European journal of human genetics : EJHG, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 34 citations in OpenAlex.

  1. Pooled it
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  14. Intellectual Abilities of Children with Narcolepsy.Journal of clinical medicine · 2020
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  18. Abnormal Microglia and Enhanced Inflammation-Related Gene Transcription in Mice with Conditional Deletion ofThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

André Mégarbané1] Institut Jérôme Lejeune, Paris, France [2] Unité de Génétique Médicale et Laboratoire Associé INSERM UMR_S910, Beirut, Lebanon.
Florian Noguier
Samantha Stora
Laurent Manchon
Clotilde Mircher
Roman Bruno
Nathalie Dorison
Fabien Pierrat
Marie-Odile Rethoré
Bernadette Trentin
Aimé Ravel
Marine Morent
Gerard Lefranc
David Piquemal
Fondation Jérôme-Lejeune · FRUniversité de Montpellier · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trisomy 21 (T21), or Down syndrome (DS), is the most frequent and recognizable cause of intellectual disabilities. The level of disability, as evaluated by the intelligence quotient (IQ) test, varies considerably between patients independent of other factors. To determine the genetic or molecular basis of this difference, a high throughput transcriptomic analysis was performed on twenty T21 patients with high and low IQ, and 10 healthy controls using Digital Gene Expression. More than 90 millions of tags were sequenced in the three libraries. A total of 80 genes of potential interest were selected for the qPCR experiment validation, and three housekeeping genes were used for normalizing purposes. HLA DQA1 and HLA DRB1 were significantly downregulated among the patients with a low IQ, the values found in the healthy controls being intermediate between those noted in the IQ+ and IQ- T21 patients. Interestingly, the intergenic region between these genes contains a binding sequence for the CCCTC-binding factor, or CTCF, and cohesin (a multisubunit complex), both of which are essential for expression of HLA DQA1 and HLA DRB1 and numerous other genes. Our results might lead to the discovery of genes, or genetic markers, that are directly involved in several phenotypes of DS and, eventually, to the identification of potential targets for therapeutic interventions.

Indexed as

Gene Expression RegulationIntelligence TestsAdolescentAdultCase-Control StudiesDown SyndromeFemaleGene Expression ProfilingHLA-DQ alpha-ChainsHLA-DRB1 ChainsHumansIntellectual DisabilityMaleRNA, MessengerYoung AdultHLA-DQA1 antigenHLA-DQ alpha-ChainsHLA-DRB1 ChainsRNA, Messenger

Identifiers

PMID23422941
PMCPMC3798834
OpenAlexW2075409615

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.