Evidence map›Paper›PMID 23418998›Full record

ArticleBMC microbiology2013

Morphology, ultrastructure, and molecular phylogeny of the ciliate Sonderia vorax with insights into the systematics of order Plagiopylida.

Letizia Modeo, Sergei I Fokin, Vittorio Boscaro, Ilaria Andreoli, Filippo Ferrantini, Giovanna Rosati, Franco Verni, Giulio Petroni

Abstract read
In one paragraph

Article in BMC microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Phylogeny of the anaerobic ciliate genusMarine life science & technology · 2022
    Article
  3. Article
  4. Article
  5. PeerJ · 2020
    Article
  6. Article
  7. Article
  8. Article
  9. Harmful Effect ofFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Letizia ModeoUnit of Protistology-Zoology, Department of Biology, University of Pisa, Pisa 56126, Italy. lmodeo@biologia.unipi.it
Sergei I Fokin
Vittorio Boscaro
Ilaria Andreoli
Filippo Ferrantini
Giovanna Rosati
Franco Verni
Giulio Petroni

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCiliates of the family Sonderiidae are common members of the eukaryotic communities in various anoxic environments. They host both ecto- and endosymbiotic prokaryotes (the latter associated with hydrogenosomes) and possess peculiar morpho-ultrastructural features, whose functions and homologies are not known. Their phylogenetic relationships with other ciliates are not completely resolved and the available literature, especially concerning electron microscopy and molecular studies, is quite scarce.

resultsSonderia vorax Kahl, 1928 is redescribed from an oxygen-deficient, brackish-water pond along the Ligurian Sea coastlines of Italy. Data on morphology, morphometry, and ultrastructure are reported. S. vorax is ovoid-ellipsoid in shape, dorsoventrally flattened, 130 x 69 μm (mean in vivo); it shows an almost spherical macronucleus, and one relatively large micronucleus. The ventral kinetom has a "secant system" including fronto-ventral and fronto-lateral kineties. A distinctive layer of bacteria laying between kineties covers the ciliate surface. Two types of extrusomes and hydrogenosomes-endosymbiotic bacteria assemblages are present in the cytoplasm. The phylogeny based on 18S rRNA gene sequences places S. vorax among Plagiopylida; Sonderiidae clusters with Plagiopylidae, although lower-level relationships remain uncertain. The studied population is fixed as neotype and the ciliate is established as type species of the genus, currently lacking.

conclusionsThis is the first description of a representative of Sonderiidae performed with both morphological and molecular data. To sum up, many previous hypotheses on this interesting, poorly known taxon are confirmed but confusion and contradictory data are as well highlighted.

Indexed as

CiliophoraCluster AnalysisDNA, ProtozoanDNA, RibosomalGenes, rRNAItalyMicroscopyMolecular Sequence DataOrganellesPhylogenyRNA, ProtozoanRNA, Ribosomal, 18SSeawaterSequence Analysis, DNADNA, ProtozoanDNA, RibosomalRNA, ProtozoanRNA, Ribosomal, 18S

Identifiers

PMID23418998
PMCPMC3626617

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.