Evidence map›Paper›PMID 23417582›Full record

ArticlePlant molecular biology2013

Host-induced gene silencing of wheat leaf rust fungus Puccinia triticina pathogenicity genes mediated by the Barley stripe mosaic virus.

Vinay Panwar, Brent McCallum, Guus Bakkeren

Abstract read
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
21.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 189 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Diverse plant RNAs coatProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Review
  7. Article
  8. Article
  9. RNA-Based Control of Fungal Pathogens in Plants.International journal of molecular sciences · 2023
    Review
  10. Review
  11. Article
  12. Candidate effectors for leaf rust resistance geneFrontiers in microbiology · 2023
    Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. The L-Type Lectin-like Receptor Kinase GeneInternational journal of molecular sciences · 2022
    Article
  19. Article
  20. Review

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Vinay PanwarAgriculture and Agri-Food Canada, Pacific Agri-Food Research Center, PO Box 5000, 4200 Hwy 97, Summerland, BC, V0H 1Z0, Canada.
Brent McCallum
Guus Bakkeren
Summerland Research and Development CentreAgriculture and Agri-Food Canada · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rust fungi are devastating plant pathogens and several Puccinia species have a large economic impact on wheat production worldwide. Disease protection, mostly offered by introgressed host-resistance genes, is often race-specific and rapidly overcome by newly-emerging virulent strains. Extensive new genomic resources have identified vital pathogenicity genes but their study is hampered because of the biotrophic life styles of rust fungi. In cereals, Barley stripe mosaic virus (BSMV)-induced RNAi has emerged as a useful tool to study loss-of-function phenotypes of candidate genes. Expression of pathogen-derived gene fragments in this system can be used to obtain in planta-generated silencing of corresponding genes inside biotrophic pathogens, a technique termed host-induced gene silencing (HIGS). Here we test the effectiveness of BSMV-mediated HIGS in the wheat leaf rust fungus Puccinia triticina (Pt) by targeting three predicted pathogenicity genes, a MAPK, a cyclophilin, and a calcineurin regulatory subunit. Inoculation of BSMV RNAi constructs generated fungal gene-specific siRNA molecules in systemic leaves of wheat plant. Subsequent Pt inoculation resulted in a suppressed disease phenotype and a reduction in endogenous transcript levels of the targeted fungal genes indicating translocation of siRNA molecules from host to fungal cells. Efficiency of this host-generated trans-specific RNAi was enhanced by using BSMV silencing vectors defective in coat protein coupled with introducing fungal gene sequences simultaneously in sense and antisense orientation. The disease suppression indicated the likely involvement of these fungal genes in pathogenicity. This study demonstrates that BSMV-mediated in planta-generated RNAi is an effective strategy for functional genomics in rust fungi.

Indexed as

Genes, FungalRNA InterferenceBasidiomycotaCapsid ProteinsCloning, MolecularColony Count, MicrobialFungal ProteinsGenetic VectorsGenome, ViralHost-Pathogen InteractionsMicroscopy, ConfocalMitogen-Activated Protein Kinase 1Mosaic VirusesPhenotypePlant DiseasesPlant LeavesCapsid ProteinsFungal ProteinsMitogen-Activated Protein Kinase 1RNA, Small InterferingRNA, ViralVirulence Factors

Identifiers

PMID23417582
OpenAlexW1977432230

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.