Evidence map›Paper›PMID 23415559›Full record

ArticleStructure (London, England : 1993)2013

An autoinhibited state in the structure of Thermotoga maritima NusG.

Johanna Drögemüller, Christian M Stegmann, Angshuman Mandal, Thomas Steiner, Björn M Burmann, Max E Gottesman, Birgitta M Wöhrl, Paul Rösch, Markus C Wahl, Kristian Schweimer

Open access · bronzeAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Evolutionary selection of proteins with two folds.bioRxiv : the preprint server for biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Johanna DrögemüllerLehrstuhl Biopolymere und Forschungszentrum für Biomakromoleküle, Universität Bayreuth, Universitätsstrasse 30, Bayreuth, Germany.
Christian M Stegmann
Angshuman Mandal
Thomas Steiner
Björn M Burmann
Max E Gottesman
Birgitta M Wöhrl
Paul Rösch
Markus C Wahl
Kristian Schweimer
University of Bayreuth · DEFreie Universität Berlin · DEColumbia University Irving Medical Center · USMax Planck Institute of Biochemistry · DE

Funding

CONTROL OF TRANSCRIPTION TERMINATION IN E. COLIR01GM037219 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI GOTTESMAN, MAX ELLIOT · 1986 to 2017
$6.6M
NIGMS NIH HHS R01 GM037219
6 · The paper itself

Abstract

NusG is a conserved regulatory protein interacting with RNA polymerase (RNAP) and other proteins to form multicomponent complexes that modulate transcription. The crystal structure of Thermotoga maritima NusG (TmNusG) shows a three-domain architecture, comprising well-conserved amino-terminal (NTD) and carboxy-terminal (CTD) domains with an additional, species-specific domain inserted into the NTD. NTD and CTD directly contact each other, occluding a surface of the NTD for binding to RNAP and a surface on the CTD interacting either with transcription termination factor Rho or transcription antitermination factor NusE. NMR spectroscopy confirmed the intramolecular NTD-CTD interaction up to the optimal growth temperature of Thermotoga maritima. The domain interaction involves a dynamic equilibrium between open and closed states and contributes significantly to the overall fold stability of the protein. Wild-type TmNusG and deletion variants could not replace endogenous Escherichia coli NusG, suggesting that the NTD-CTD interaction of TmNusG represents an autoinhibited state.

Indexed as

Bacterial ProteinsBinding SitesCrystallography, X-RayDNA-Directed RNA PolymerasesEscherichia coliEscherichia coli ProteinsGenetic Complementation TestMolecular Dynamics SimulationPeptide Elongation FactorsProtein BindingProtein Interaction Domains and MotifsProtein StabilityProtein Structure, SecondaryRecombinant ProteinsRho FactorRibosomal ProteinsBacterial ProteinsDNA-Directed RNA PolymerasesEscherichia coli ProteinsNusG protein, E coliPeptide Elongation FactorsRecombinant ProteinsRho FactorRibosomal Proteinsribosomal protein S10Transcription Factors

Identifiers

PMID23415559
PMCPMC3764593
OpenAlexW2094725327

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.