Evidence map›Paper›PMID 23414300›Full record

ArticleBrain pathology (Zurich, Switzerland)2013

Evaluation of histone 3 lysine 27 trimethylation (H3K27me3) and enhancer of Zest 2 (EZH2) in pediatric glial and glioneuronal tumors shows decreased H3K27me3 in H3F3A K27M mutant glioblastomas.

Sriram Venneti, Mihir T Garimella, Lisa M Sullivan, Daniel Martinez, Jason T Huse, Adriana Heguy, Mariarita Santi, Craig B Thompson, Alexander R Judkins

Open access · bronzeAbstract read
In one paragraph

Article in Brain pathology (Zurich, Switzerland), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 136 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
136citing papers in PubMed, 1 pooled it
10.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

136 citing papers in PubMed, 1 synthesis or guideline pooled it, 220 citations in OpenAlex.

  1. The clinicopathological and prognostic significance of TP53 alteration in K27M mutated gliomas: an individual-participant data meta-analysis.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2018
    Pooled it
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  17. Histone mutations in cancer.Biochemical Society transactions · 2023
    Article
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  20. Targeting SWI/SNF ATPases in H3.3K27M diffuse intrinsic pontine gliomas.Proceedings of the National Academy of Sciences of the United States of America · 2023
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76 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Sriram VennetiCancer biology and Genetics Program, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.
Mihir T Garimella
Lisa M Sullivan
Daniel Martinez
Jason T Huse
Adriana Heguy
Mariarita Santi
Craig B Thompson
Alexander R Judkins
Memorial Sloan Kettering Cancer Center · USUniversity of Pennsylvania · USChildren's Hospital of Los Angeles · USChildren's Hospital of Philadelphia · USUniversity of Pittsburgh · US

Funding

Cancer cell survival during factor deprivationR01CA105463 · NCI · UNIVERSITY OF PENNSYLVANIA · PI THOMPSON, CRAIG B · 2004 to 2013
$3.2M
NCI NIH HHS R01 CA105463
6 · The paper itself

Abstract

H3F3A mutations are seen in ∼30% of pediatric glioblastoma (GBMs) and involve either the lysine residue at position 27 (K27M) or glycine at position 34 (G34R/V). Sixteen genes encode histone H3, each variant differing in only a few amino acids. Therefore, how mutations in a single H3 gene contribute to carcinogenesis is unknown. H3F3A K27M mutations are predicted to alter methylation of H3K27. H3K27me3 is a repressive mark critical to stem cell maintenance and is mediated by EZH2, a member of the polycomb-group (PcG) family. We evaluated H3K27me3 and EZH2 expression using immunohistochemistry in 76 pediatric brain tumors. H3K27me3 was lowered/absent in tumor cells but preserved in endothelial cells and infiltrating lymphocytes in six out of 20 GBMs. H3K27me3 showed strong immunoreactivity in all other tumor subtypes. Sequencing of GBMs showed H3F3A K27M mutations in all six cases with lowered/absent H3K27me3. EZH2 expression was high in GBMs, but absent/focal in other tumors. However, no significant differences in EZH2 expression were observed between H3F3A K27M mutant and wild type GBMs, suggesting that EZH2 mediated trimethylation of H3K27 is inhibited in GBM harboring K27M mutations. Our results indicate that H3F3A K27M mutant GBMs show decreased H3K27me3 that may be of both diagnostic and biological relevance.

Indexed as

AdolescentBrain NeoplasmsChildCohort StudiesEnhancer of Zeste Homolog 2 ProteinFemaleGene Expression Regulation, NeoplasticGlioblastomaHistonesHumansLysineMaleMethionineMutationNeurogliaPolycomb Repressive Complex 2Enhancer of Zeste Homolog 2 ProteinEZH2 protein, humanHistonesLysineMethioninePolycomb Repressive Complex 2epigeneticsEZH2H3F3A mutationsH3K27me3methylationpediatric glioblastoma

Identifiers

PMID23414300
PMCPMC3701028
OpenAlexW2171425841

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.