Evidence map›Paper›PMID 23411694›Full record

ArticlePlant physiology2013

Identification of a dual-targeted protein belonging to the mitochondrial carrier family that is required for early leaf development in rice.

Jiming Xu, Jian Yang, Zhongchang Wu, Huili Liu, Fangliang Huang, Yunrong Wu, Chris Carrie, Reena Narsai, Monika Murcha, James Whelan and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Map-based cloning and characterization ofMolecular breeding : new strategies in plant improvement · 2024
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  4. International journal of molecular sciences · 2023
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  5. Photosynthetic characteristics and genetic mapping of a new yellow leaf mutantMolecular breeding : new strategies in plant improvement · 2023
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  6. A multi-omics approach identifiesHorticulture research · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Jiming XuState Key Laboratory of Plant Physiology and Biochemistry, College of Life Science, Zhejiang University, Hangzhou 310058, China.
Jian Yang
Zhongchang Wu
Huili Liu
Fangliang Huang
Yunrong Wu
Chris Carrie
Reena Narsai
Monika Murcha
James Whelan
Ping Wu
Zhejiang University · CNState Key Laboratory of Plant Physiology and BiochemistryUniversity of Western Australia · AULudwig-Maximilians-Universität München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A dual-targeted protein belonging to the mitochondrial carrier family was characterized in rice (Oryza sativa) and designated 3'-Phosphoadenosine 5'-Phosphosulfate Transporter1 (PAPST1). The papst1 mutant plants showed a defect in thylakoid development, resulting in leaf chlorosis at an early leaf developmental stage, while normal leaf development was restored 4 to 6 d after leaf emergence. OsPAPST1 is highly expressed in young leaves and roots, while the expression is reduced in mature leaves, in line with the recovery of chloroplast development seen in the older leaves of papst1 mutant plants. OsPAPST1 is located on the outer mitochondrial membrane and chloroplast envelope. Whole-genome transcriptomic analysis reveals reduced expression of genes encoding photosynthetic components (light reactions) in papst1 mutant plants. In addition, sulfur metabolism is also perturbed in papst1 plants, and it was seen that PAPST1 can act as a nucleotide transporter when expressed in Escherichia coli that can be inhibited significantly by 3'-phosphoadenosine 5'-phosphosulfate. Given these findings, together with the altered phenotype seen only when leaves are first exposed to light, it is proposed that PAPST1 may act as a 3'-phosphoadenosine 5'-phosphosulfate carrier that has been shown to act as a retrograde signal between chloroplasts and the nucleus.

Indexed as

Adenosine DiphosphateAdenosine TriphosphateArabidopsisChloroplastsCloning, MolecularEscherichia coliGene Expression Regulation, PlantGenes, PlantGenetic Complementation TestKineticsMitochondriaMitochondrial ProteinsMutationOryzaPhenotypePhylogenyAdenosine DiphosphateAdenosine TriphosphateMitochondrial ProteinsPlant Proteins

Identifiers

PMID23411694
PMCPMC3613474
OpenAlexW2133894953

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.