Evidence map›Paper›PMID 23409765›Full record

ArticleCurrent topics in medicinal chemistry2013

Impact of quaternary structure dynamics on allosteric drug discovery.

Eileen K Jaffe

Open access · bronzeAbstract read
In one paragraph

Article in Current topics in medicinal chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Probing allosteric mechanisms using native mass spectrometry.Current opinion in structural biology · 2015
    Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Eileen K JaffeInstitute for Cancer Research, Fox Chase Cancer Center, Philadelphia, PA 19111, USA. eileen.jaffe@fccc.edu
Fox Chase Cancer Center · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Margaret von Mehren · 1985 to 2026
$138.8M
The Porphobilinogen Synthase FamilyR01ES003654 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI JAFFE, EILEEN K · 1985 to 2012
$3.9M
Low Activity Oligomers of Porphobilinogen Synthase as Antibiotic TargetsR56AI077577 · NIAID · RESEARCH INST OF FOX CHASE CAN CTR · PI JAFFE, EILEEN K · 2009 to 2010
$447k
NCI NIH HHS P30 CA006927NCI NIH HHS P30CA006927NIAID NIH HHS R56 AI077577NIAID NIH HHS R56AI077577NIEHS NIH HHS R01 ES003654NIEHS NIH HHS R01ES003654
6 · The paper itself

Abstract

The morpheein model of allosteric regulation draws attention to proteins that can exist as an equilibrium of functionally distinct assemblies where: one subunit conformation assembles into one multimer; a different subunit conformation assembles into a different multimer; and the various multimers are in a dynamic equilibrium whose position can be modulated by ligands that bind to a multimer-specific ligand binding site. The case study of porphobilinogen synthase (PBGS) illustrates how such an equilibrium holds lessons for disease mechanisms, drug discovery, understanding drug side effects, and identifying proteins wherein drug discovery efforts might focus on quaternary structure dynamics. The morpheein model of allostery has been proposed as applicable for a wide assortment of disease-associated proteins (Selwood, T., Jaffe, E., (2012) Arch. Bioch. Biophys, 519:131-143). Herein we discuss quaternary structure dynamics aspects to drug discovery for the disease-associated putative morpheeins phenylalanine hydroxylase, HIV integrase, pyruvate kinase, and tumor necrosis factor α. Also highlighted is the quaternary structure equilibrium of transthyretin and successful drug discovery efforts focused on controlling its quaternary structure dynamics.

Indexed as

Allosteric RegulationAllosteric SiteDrug DiscoveryDrugs, InvestigationalHIV IntegraseHumansLigandsMolecular Dynamics SimulationPhenylalanine HydroxylasePorphobilinogen SynthasePrealbuminProtein MultimerizationProtein Structure, QuaternaryPyruvate KinaseTumor Necrosis Factor-alphaDrugs, InvestigationalHIV IntegraseLigandsPhenylalanine HydroxylasePorphobilinogen SynthasePrealbuminPyruvate KinaseTumor Necrosis Factor-alpha

Identifiers

PMID23409765
PMCPMC3631351
OpenAlexW2005599905

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.