Evidence map›Paper›PMID 23408795›Full record

ArticleStandards in genomic sciences2012

Complete genome sequence of Corynebacterium pseudotuberculosis biovar ovis strain P54B96 isolated from antelope in South Africa obtained by rapid next generation sequencing technology.

Syed Shah Hassan, Luis Carlos Guimarães, Ulisses de Pádua Pereira, Arshad Islam, Amjad Ali, Syeda Marriam Bakhtiar, Dayana Ribeiro, Anderson Rodrigues Dos Santos, Siomar de Castro Soares, Fernanda Dorella and 20 more

Abstract read
In one paragraph

Article in Standards in genomic sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Druggable proteins ofFrontiers in pharmacology · 2025
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  3. First genome sequencing and comparative analyses ofStandards in genomic sciences · 2018
    Article
  4. Exploration of Nitrate Reductase Metabolic Pathway inInternational journal of genomics · 2017
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors.

Syed Shah HassanLaboratório de Genética Celular e Molecular, Departamento de Biologia Geral, Instituto de Ciências Biológicas (ICB), Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.
Luis Carlos Guimarães
Ulisses de Pádua Pereira
Arshad Islam
Amjad Ali
Syeda Marriam Bakhtiar
Dayana Ribeiro
Anderson Rodrigues Dos Santos
Siomar de Castro Soares
Fernanda Dorella
Anne Cybelle Pinto
Maria Paula Cruz Schneider
Maria Silvanira Barbosa
Síntia Almeida
Vinícius Abreu
Flávia Aburjaile
Adriana Ribeiro Carneiro
Louise Teixeira Cerdeira
Karina Fiaux
Eudes Barbosa
Carlos Diniz
Flavia S Rocha
Rommel Thiago Jucá Ramos
Neha Jain
Sandeep Tiwari
Debmalya Barh
Anderson Miyoshi
Borna Müller
Artur Silva
Vasco Azevedo

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Actinobacteria, Corynebacterium pseudotuberculosis strain P54B96, a nonmotile, non-sporulating and a mesophile bacterium, was isolated from liver, lung and mediastinal lymph node lesions in an antelope from South Africa. This strain is interesting in the sense that it has been found together with non-tuberculous mycobacteria (NTMs) which could nevertheless play a role in the lesion formation. In this work, we describe a set of features of C. pseudotuberculosis P54B96, together with the details of the complete genome sequence and annotation. The genome comprises of 2.34 Mbp long, single circular genome with 2,084 protein-coding genes, 12 rRNA, 49 tRNA and 62 pseudogenes and a G+C content of 52.19%. The analysis of the genome sequence provides means to better understanding the molecular and genetic basis of virulence of this bacterium, enabling a detailed investigation of its pathogenesis.

Indexed as

Antelopecaseous lymphadenitis/cheesy gland diseasegenome sequencingGram-positive pathogenIon Torrentliver lesions: biovar ovis

Identifiers

PMID23408795
PMCPMC3569390

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.