Evidence map›Paper›PMID 23408116›Full record

ArticleThe Journal of pharmacology and experimental therapeutics2013

The UDP-glucuronosyltransferase (UGT) 1A polymorphism c.2042C>G (rs8330) is associated with increased human liver acetaminophen glucuronidation, increased UGT1A exon 5a/5b splice variant mRNA ratio, and decreased risk of unintentional acetaminophen-induced acute liver failure.

Michael H Court, Marina Freytsis, Xueding Wang, Inga Peter, Chantal Guillemette, Suwagmani Hazarika, Su X Duan, David J Greenblatt, William M Lee, Acute Liver Failure Study Group

2 registry-linked trialsOpen access · bronzeAbstract read
In one paragraph

Article in The Journal of pharmacology and experimental therapeutics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
11.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00518440 completednot on this map

A Multi-Center Trial to Study Acute Liver Failure in Adults

TypeobservationalSponsorWilliam LeeRan1998 to 2019Enrolled3,488ConditionsAcute Liver Failure, Fulminant Hepatic Failure, Acute Liver Injury
NCT00768716 phase4completednot on this map

Effect of Race/Ethnicity and Genes on Acetaminophen Pharmacokinetics

TypeinterventionalSponsorTufts UniversityRan2008 to 2013Enrolled95ConditionsPain, Fever, HepatotoxicityArmsAcetaminophen
3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 80 citations in OpenAlex.

  1. A Multi-Omic Mosaic Model of Acetaminophen Induced Alanine Aminotransferase Elevation.Journal of medical toxicology : official journal of the American College of Medical Toxicology · 2023
    Trial
  2. Trial
  3. BioMed research international · 2018
    Trial
  4. Article
  5. Article
  6. Article
  7. Observational
  8. Review
  9. Article
  10. Review
  11. Review
  12. The Genomics of Elevated ALT and Adducts in Therapeutic Acetaminophen Treatment: a Pilot Study.Journal of medical toxicology : official journal of the American College of Medical Toxicology · 2021
    Article
  13. Article
  14. Article
  15. Review
  16. Acetaminophen Hepatotoxicity.Seminars in liver disease · 2019
    Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Michael H CourtComparative and Molecular Pharmacogenomics Laboratory, Department of Veterinary Clinical Sciences, Washington State University College of Veterinary Medicine, 100 Grimes Way, Pullman, WA 99164, USA. michael.court@vetmed.wsu.edu
Marina Freytsis
Xueding Wang
Inga Peter
Chantal Guillemette
Suwagmani Hazarika
Su X Duan
David J Greenblatt
William M Lee
Acute Liver Failure Study Group
The University of Texas Southwestern Medical Center · USCentre hospitalier universitaire de Québec · CATufts University · USUniversité Laval · CAIcahn School of Medicine at Mount Sinai · US

Funding

A Multi-Center Study of Acute Liver Failure in AdultsU01DK058369 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI DURKALSKI, VALERIE L, FONTANA, ROBERT J · 2005 to 2019
$27.4M
MOLECULAR DETERMINANTS OF UGT FUNCTIONR01GM061834 · NIGMS · TUFTS UNIVERSITY BOSTON · PI COURT, MICHAEL H · 2000 to 2010
$2.4M
MicroRNAs as effectors of variable human drug metabolismR01GM102130 · NIGMS · WASHINGTON STATE UNIVERSITY · PI COURT, MICHAEL H · 2012 to 2015
$1.1M
CIHR MOP-42392CIHR MOP-84223NIDDK NIH HHS N01-DK-7-0004NIDDK NIH HHS U01 DK058369NIDDK NIH HHS U01-DK58369NIGMS NIH HHS R01 GM061834NIGMS NIH HHS R01-GM061834NIGMS NIH HHS R01 GM102130
6 · The paper itself

Abstract

Acetaminophen is cleared primarily by hepatic glucuronidation. Polymorphisms in genes encoding the acetaminophen UDP-glucuronosyltransferase (UGT) enzymes could explain interindividual variability in acetaminophen glucuronidation and variable risk for liver injury after acetaminophen overdose. In this study, human liver bank samples were phenotyped for acetaminophen glucuronidation activity and genotyped for the major acetaminophen-glucuronidating enzymes (UGTs 1A1, 1A6, 1A9, and 2B15). Of these, only three linked single nucleotide polymorphisms (SNPs) located in the shared UGT1A-3'UTR region (rs10929303, rs1042640, rs8330) were associated with acetaminophen glucuronidation activity, with rs8330 consistently showing higher acetaminophen glucuronidation at all the tested concentrations of acetaminophen. Mechanistic studies using luciferase-UGT1A-3'UTR reporters indicated that these SNPs do not alter mRNA stability or translation efficiency. However, there was evidence for allelic imbalance and a gene-dose proportional increase in the amount of exon 5a versus exon 5b containing UGT1A mRNA spliced transcripts in livers with the rs8330 variant allele. Cotransfection studies demonstrated an inhibitory effect of exon 5b containing cDNAs on acetaminophen glucuronidation by UGT1A1 and UGT1A6 cDNAs containing exon 5a. In silico analysis predicted that rs8330 creates an exon splice enhancer site that could favor exon 5a (over exon 5b) utilization during splicing. Finally, the prevalence of rs8330 was significantly lower (P = 0.027, χ(2) test) in patients who had acute liver failure from unintentional acetaminophen overdose compared with patients with acute liver failure from other causes or a race- or ethnicity-matched population. Together, these findings suggest that rs8330 is an important determinant of acetaminophen glucuronidation and could affect an individual's risk for acetaminophen-induced liver injury.

Indexed as

AcetaminophenAdolescentAdultAgedAllelesAnalgesics, Non-NarcoticAsian PeopleBlack PeopleChildChild, PreschoolDNAExonsFemaleGenotypeGlucuronidesGlucuronosyltransferaseAcetaminophenAnalgesics, Non-NarcoticDNAGlucuronidesGlucuronosyltransferaseProtein IsoformsRNA, MessengerUGT1A1 Enzyme

Identifiers

PMID23408116
PMCPMC3629801
OpenAlexW2160273926

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.