Evidence map›Paper›PMID 23406172›Full record

Trial reportBritish journal of haematology2013

Genetic determinants of haemolysis in sickle cell anaemia.

Jacqueline N Milton, Helen Rooks, Emma Drasar, Elizabeth L McCabe, Clinton T Baldwin, Efi Melista, Victor R Gordeuk, Mehdi Nouraie, Gregory R Kato, Gregory J Kato and 12 more

Erratum issued Registry-linked trialOpen access · bronzeAbstract readClinical TrialMulticenter Study
In one paragraph

Trial report in British journal of haematology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to trial NCT02824471 (Sickle Cell Disease), which is not on this map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02824471 recruitingnot on this mapstarted 2014, after this paper: background citation

Sickle Cell Disease (SCD) Biochip': Towards a Simple and Reliable Way to Monitor Sickle Cell Disease

TypeobservationalSponsorUniversity Hospitals Cleveland Medical CenterRan2014 to 2028Enrolled100ConditionsSickle Cell DiseaseArmsSCD Group
3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

  1. Pooled it
  2. Sequencing and health data resource of children of African ancestry.Genetics in medicine : official journal of the American College of Medical Genetics · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Pathophysiology of Sickle Cell Disease.Annual review of pathology · 2019
    Review
  17. Sickle cell disease in the era of precision medicine: looking to the future.Expert review of precision medicine and drug development · 2019
    Article
  18. Biomarker signatures of sickle cell disease severity.Blood cells, molecules & diseases · 2018
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
  • Erratum issued
    Kato, Gregory R [corrected to Kata, Gregory J]
5 · Who and what money

Authors and funding

22 authors at 8 institutions in 2 countries.

Jacqueline N MiltonBiostatistics, Boston University School of Medicine, 72 E. Concord St., Boston, MA 02118, USA.
Helen Rooks
Emma Drasar
Elizabeth L McCabe
Clinton T Baldwin
Efi Melista
Victor R Gordeuk
Mehdi Nouraie
Gregory R Kato
Gregory J Kato
Caterina Minniti
James Taylor
Andrew Campbell
Lori Luchtman-Jones
Sohail Rana
Oswaldo Castro
Yingze Zhang
Swee Lay Thein
Paola Sebastiani
Mark T Gladwin
Walk-PHAAST Investigators
Martin H Steinberg
Boston University · USHoward University · USNational Heart Lung and Blood Institute · USKing's College London · GBUniversity of Pittsburgh · USChildren's National · USKing's College School · GBUniversity of Michigan · US

Funding

Vascular Subphenotypes of Lung DiseaseP01HL103455 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GLADWIN, MARK T · 2011 to 2020
$26.1M
UVDM01RR010284 · NCRR · HOWARD UNIVERSITY · PI TAYLOR, ROBERT E. · 1996 to 2010
$17.4M
Storage Lesion in Banked Blood Due to Disruption of Nitric Oxide HomeostasisR01HL098032 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Mark T Gladwin · 2009 to 2026
$12.5M
Pulmonary Hypertension and the Hypoxic Response in SCDR01HL079912 · NHLBI · HOWARD UNIVERSITY · PI GORDEUK, VICTOR R · 2005 to 2008
$7.4M
Genome-Wide Association Studies in Sickle Cell Anemia and in CentenariansR01HL087681 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI STEINBERG, MARTIN H. · 2007 to 2010
$6.0M
RESEARCH TRAINING IN BLOOD DISEASES AND RESOURCEST32HL007501 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI LERNER, ADAM, STEINBERG, MARTIN H. · 1985 to 2018
$5.4M
Genomic Determinants of Phenotypes of Sickle Cell DiseaseZIAHL006160 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI TAYLOR, JAMES · 2012 to 2016
$5.1M
Howard University Research Scientist AwardR25HL003679 · NHLBI · HOWARD UNIVERSITY · PI NEKHAI, SERGEI · 2005 to 2009
$1.7M
Myoglobin as a Nitrite Reductase that Regulates Hypoxic Cardiac NO SignalingR01HL096973 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GLADWIN, MARK T, SHIVA, SRUTI · 2010 to 2013
$1.5M
Treatment of PH and SCD with Sildenafil TherapyZIAHL005116 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI KATO, GREGORY · 2009 to 2012
$1.4M
CCR NIH HHS RC2 L101212Intramural NIH HHS ZIA HL005116Medical Research Council G0000111Medical Research Council G0001249 ID 56477NCRR NIH HHS 2M01 RR10284-10NCRR NIH HHS M01 RR010284NHLBI NIH HHS 2R25 HL003679-8NHLBI NIH HHS 5T32 HL007501NHLBI NIH HHS P01 HL103455NHLBI NIH HHS P01HL103455NHLBI NIH HHS R01 HL079912NHLBI NIH HHS R01 HL087681NHLBI NIH HHS R01 HL096973NHLBI NIH HHS R01HL096973NHLBI NIH HHS R01 HL098032NHLBI NIH HHS R01HL098032NHLBI NIH HHS R01 HL87681NHLBI NIH HHS R25 HL003679NHLBI NIH HHS T32 HL007501
6 · The paper itself

Abstract

Haemolytic anaemia is variable among patients with sickle cell anaemia and can be estimated by reticulocyte count, lactate dehydrogenase, aspartate aminotransferase and bilirubin levels. Using principal component analysis of these measurements we computed a haemolytic score that we used as a subphenotype in a genome-wide association study. We identified in one cohort and replicated in two additional cohorts the association of a single nucleotide polymorphism in NPRL3 (rs7203560; chr16p13·3) (P = 6·04 × 10(-07) ). This association was validated by targeted genotyping in a fourth independent cohort. The HBA1/HBA2 regulatory elements, hypersensitive sites (HS)-33, HS-40 and HS-48 are located in introns of NPRL3. Rs7203560 was in perfect linkage disequilibrium (LD) with rs9926112 (r(2)  = 1) and in strong LD with rs7197554 (r(2)  = 0·75) and rs13336641 (r(2)  = 0·77); the latter is located between HS-33 and HS-40 sites and next to a CTCF binding site. The minor allele for rs7203560 was associated with the -∝(3·7) thalassaemia gene deletion. When adjusting for HbF and ∝ thalassaemia, the association of NPRL3 with the haemolytic score was significant (P = 0·00375) and remained significant when examining only cases without gene deletion∝ thalassaemia (P = 0·02463). Perhaps by independently down-regulating expression of the HBA1/HBA2 genes, variants of the HBA1/HBA2 gene regulatory loci, tagged by rs7203560, reduce haemolysis in sickle cell anaemia.

Indexed as

AllelesGenetic LociPolymorphism, Single NucleotideResponse ElementsAdolescentAdultAgedAged, 80 and overAnemia, Sickle CellChildCohort StudiesFemaleGlycated HemoglobinGTPase-Activating ProteinsHemoglobins, AbnormalHemolysisGlycated HemoglobinGTPase-Activating ProteinsHemoglobins, AbnormalNPRL3 protein, humanNuclear Proteins

Identifiers

PMID23406172
PMCPMC4129543
OpenAlexW1972964884

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.