Evidence map›Paper›PMID 23405193›Full record

ArticlePloS one2013

Transition of a microRNA from repressing to activating translation depending on the extent of base pairing with the target.

Ashesh A Saraiya, Wei Li, Ching C Wang

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 40 citations in OpenAlex.

  1. NamiRNA-Enhancer Network: The Changing Era Challenge and Chance of miRNA.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Role of microRNA in diabetic cardiomyopathy: From mechanism to intervention.Biochimica et biophysica acta. Molecular basis of disease · 2017
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ashesh A SaraiyaDepartment of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, California, United States of America.
Wei Li
Ching C Wang
University of California, San Francisco · US

Funding

Translation Regulation in Giardia lambliaR01AI030475 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WANG, CHING CHUNG · 1991 to 2011
$3.9M
NIAID NIH HHS AI30475NIAID NIH HHS R01 AI030475
6 · The paper itself

Abstract

MicroRNAs are major post-transcriptional regulators of gene expression. Here we show in the ancient protozoan Giardia lamblia a snoRNA-derived 26-nucleotide microRNA, miR3, which represses the translation of histone H2A mRNA containing an imperfect target but enhances translation when the target is made fully complementary. A stepwise mutational analysis of the fully complementary target showed that the activating effect of miR3 was significantly reduced when a single nucleotide at the 5'-end of the target was altered. The effect of miR3 became repressive when 12 of the nucleotides lost their complementation to miR3 with maximum repression reached when only 8 base-pairs remained between the miR3 seed sequence and the target. A synthetic 8-nucleotide RNA oligomer of the miR3 seed sequence was found capable of exerting a similar Argonaute-dependent translational repression. This is the first report showing a correlation between the extent of base-pairing with the target and a change in miRNA function.

Indexed as

Epigenetic RepressionGene Expression RegulationProtein Biosynthesis3' Untranslated RegionsBase PairingDNA PrimersGiardia lambliaHistonesMicroRNAsMutationRNA, Small Nucleolar3' Untranslated RegionsDNA PrimersHistonesMicroRNAsRNA, Small Nucleolar

Identifiers

PMID23405193
PMCPMC3565978
OpenAlexW2078911366

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.