Evidence map›Paper›PMID 23401530›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Positive and negative feedback loops in the p53 and mRNA 3' processing pathways.

Emral Devany, Xiaokan Zhang, Ji Yeon Park, Bin Tian, Frida Esther Kleiman

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. p53 in the Molecular Circuitry of Bone Marrow Failure Syndromes.International journal of molecular sciences · 2023
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Germline mutation ofScience advances · 2020
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Emral DevanyChemistry Department, Hunter College and Graduate Center, City University of New York, New York, NY 10065, USA.
Xiaokan Zhang
Ji Yeon Park
Bin Tian
Frida Esther Kleiman
Hunter College · USRutgers New Jersey Medical SchoolRutgers, The State University of New Jersey · USThe Graduate Center, CUNY · US

Funding

Basic and Translational Research Center for Reducing Health DisparitiesG12MD007599 · NIMHD · HUNTER COLLEGE · PI ANGULO, JESUS A · 2012 to 2017
$14.6M
Regulation of Alternative Cleavage and PolyadenylationR01GM084089 · NIGMS · WISTAR INSTITUTE · PI TIAN, BIN · 2008 to 2023
$6.7M
Mechanisms of Response to DNA Damage Nuclear FactorsSC1GM083806 · NIGMS · HUNTER COLLEGE · PI KLEIMAN, FRIDA E · 2008 to 2011
$1.4M
Illumina NextSeq500 DNA Sequencing SystemS10OD018206 · OD · RBHS-NEW JERSEY MEDICAL SCHOOL · PI TIAN, BIN · 2015 to 2015
$227k
NIGMS NIH HHS GM084089NIGMS NIH HHS R01 GM084089NIGMS NIH HHS SC1 GM083806NIGMS NIH HHS SC1GM083806NIH HHS S10 OD018206NIMHD NIH HHS G12 MD007599
6 · The paper itself

Abstract

Although the p53 network has been intensively studied, genetic analyses long hinted at the existence of components that remained elusive. Recent studies have shown regulation of p53 at the mRNA level mediated via both the 5' and the 3' untranslated regions and affecting the stability and translation efficiency of the p53 mRNA. Here, we provide evidence of a feedback loop between p53 and the poly(A)-specific ribonuclease (PARN), in which PARN deadenylase keeps p53 levels low in nonstress conditions by destabilizing p53 mRNA, and the UV-induced increase in p53 activates PARN deadenylase, regulating gene expression during DNA damage response in a transactivation-independent manner. This model is innovative because it provides insights into p53 function and the mechanisms behind the regulation of mRNA 3' end processing in different cellular conditions.

Indexed as

Feedback, Physiological3' Untranslated RegionsAnimalsAU Rich ElementsCell Line, TumorExoribonucleasesGene Expression Regulation, NeoplasticHumansMiceModels, GeneticProtein BindingRNA 3' End ProcessingRNA, MessengerRNA, Small InterferingSignal TransductionStress, Physiological3' Untranslated RegionsExoribonucleasesRNA, MessengerRNA, Small InterferingTumor Suppressor Protein p53

Identifiers

PMID23401530
PMCPMC3587245
OpenAlexW1995210348

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.