Evidence map›Paper›PMID 23401504›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Expression profiling of mouse subplate reveals a dynamic gene network and disease association with autism and schizophrenia.

Anna Hoerder-Suabedissen, Franziska M Oeschger, Michelle L Krishnan, T Grant Belgard, Wei Zhi Wang, Sheena Lee, Caleb Webber, Enrico Petretto, A David Edwards, Zoltán Molnár

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 120 citations in OpenAlex.

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  8. Development and Evolution of Thalamocortical Connectivity.Cold Spring Harbor perspectives in biology · 2024
    Review
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  20. Chromatin remodelerProceedings of the National Academy of Sciences of the United States of America · 2021
    Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Anna Hoerder-SuabedissenDepartment of Physiology, Anatomy and Genetics, University of Oxford, Oxford OX1 3QX, United Kingdom. anna.hoerder-suabedissen@dpag.ox.ac.uk
Franziska M Oeschger
Michelle L Krishnan
T Grant Belgard
Wei Zhi Wang
Sheena Lee
Caleb Webber
Enrico Petretto
A David Edwards
Zoltán Molnár
University of Oxford · GBKing's College London · GBMedical Research Council · GBMRC London Institute of Medical Sciences · GB

Funding

Medical Research Council G00900901Medical Research Council G0500180Medical Research Council G0700377Medical Research Council MC_U120097112Medical Research Council MC_UP_A320_1004Medical Research Council MC_UU_12021/4Medical Research Council MR/K006355/1Medical Research Council MR/L001578/1Wellcome Trust
6 · The paper itself

Abstract

The subplate zone is a highly dynamic transient sector of the developing cerebral cortex that contains some of the earliest generated neurons and the first functional synapses of the cerebral cortex. Subplate cells have important functions in early establishment and maturation of thalamocortical connections, as well as in the development of inhibitory cortical circuits in sensory areas. So far no role has been identified for cells in the subplate in the mature brain and disease association of the subplate-specific genes has not been analyzed systematically. Here we present gene expression evidence for distinct roles of the mouse subplate across development as well as unique molecular markers to extend the repertoire of subplate labels. Performing systematic comparisons between different ages (embryonic days 15 and 18, postnatal day 8, and adult), we reveal the dynamic and constant features of the markers labeling subplate cells during embryonic and early postnatal development and in the adult. This can be visualized using the online database of subplate gene expression at https://molnar.dpag.ox.ac.uk/subplate/. We also identify embryonic similarities in gene expression between the ventricular zones, intermediate zone, and subplate, and distinct postnatal similarities between subplate, layer 5, and layers 2/3. The genes expressed in a subplate-specific manner at some point during development show a statistically significant enrichment for association with autism spectrum disorders and schizophrenia. Our report emphasizes the importance of the study of transient features of the developing brain to better understand neurodevelopmental disorders.

Indexed as

Gene Expression ProfilingGenetic Association StudiesGenetic Predisposition to DiseaseAnimalsAnimals, NewbornAutistic DisorderCerebral CortexGene Expression Regulation, DevelopmentalGene Regulatory NetworksMiceMice, Inbred C57BLOrgan SpecificityProtein Interaction MapsSchizophreniaTime Factors

Identifiers

PMID23401504
PMCPMC3587197
OpenAlexW2095754193

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.