Evidence map›Paper›PMID 23399987›Full record

ArticleFrontiers in biology2013

Alternative splicing switching in stem cell lineages.

Iouri Chepelev, Xin Chen

Abstract read
In one paragraph

Article in Frontiers in biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
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  3. Co-expression of PADI isoforms during progenitor differentiation enables functional diversity.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
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  5. Review
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  16. Asymmetric distribution of histones during Drosophila male germline stem cell asymmetric divisions.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Iouri ChepelevSystems Biology Center, National Heart, Lung and Blood Institute, NIH, Bethesda, MD 20892, USA.
Xin Chen

Funding

Epigenetic Regulation of Germ Cell Differentiation from a Stem Cell LineageR01HD065816 · NICHD · JOHNS HOPKINS UNIVERSITY · PI CHEN, XIN · 2011 to 2015
$1.6M
Epigenetic Regulation of Germ Cell Differentiation from a Stem Cell LineageR00HD055052 · NICHD · JOHNS HOPKINS UNIVERSITY · PI CHEN, XIN · 2008 to 2010
$745k
Epigenetic inheritance in germline stem cell lineageR21HD065089 · NICHD · JOHNS HOPKINS UNIVERSITY · PI CHEN, XIN · 2010 to 2011
$380k
Intramural NIH HHS Z99 HL999999NICHD NIH HHS R00 HD055052NICHD NIH HHS R01 HD065816NICHD NIH HHS R21 HD065089
6 · The paper itself

Abstract

The application of stem cells to regenerative medicine depends on a thorough understanding of the molecular mechanisms underlying their pluripotency. Many studies have identified key transcription factor-regulated transcriptional networks and chromatin landscapes of embryonic and a number of adult stem cells. In addition, recent publications have revealed another interesting molecular feature of stem cells- a distinct alternative splicing pattern. Thus, it is possible that both the identity and activity of stem cells are maintained by stem cell-specific mRNA isoforms, while switching to different isoforms ensures proper differentiation. In this review, we will discuss the generality of mRNA isoform switching and its interaction with other molecular mechanisms to regulate stem cell pluripotency, as well as the reprogramming process in which differentiated cells are induced to become pluripotent stem cell-like cells (iPSCs).

Indexed as

adult stem cellsalternative splicingembryonic stem cellsepigenetic regulationpost-transcriptional regulationstem cell maintenance and differentiation

Identifiers

PMID23399987
PMCPMC3566875

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.