Evidence map›Paper›PMID 23399955›Full record

ArticleGastroenterology2013

Prevalence of germline PTEN, BMPR1A, SMAD4, STK11, and ENG mutations in patients with moderate-load colorectal polyps.

Joanne Ngeow, Brandie Heald, Lisa A Rybicki, Mohammed S Orloff, Jin Lian Chen, Xiuli Liu, Lisa Yerian, Joseph Willis, Heli J Lehtonen, Rainer Lehtonen and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Gastroenterology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
5.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. A co-regulatory network ofAmerican journal of cancer research · 2023
    Article
  8. Cost-Effectiveness of Colorectal Cancer Genetic Testing.International journal of environmental research and public health · 2021
    Article
  9. Article
  10. Review
  11. Article
  12. Early-onset renal cell carcinoma inNPJ genomic medicine · 2020
    Article
  13. Juvenile polyposis syndrome.Clinical case reports · 2020
    Article
  14. Cancers · 2019
    Review
  15. Observational
  16. Genetic Testing for Polyposis Syndromes.Clinics in colon and rectal surgery · 2016
    Review
  17. Review
  18. Review
  19. Article
  20. Next-Generation Sequencing Panels for the Diagnosis of Colorectal Cancer and Polyposis Syndromes: A Cost-Effectiveness Analysis.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 2 countries.

Joanne NgeowGenomic Medicine Institute, Cleveland Clinic, Cleveland, Ohio 44195, USA.
Brandie Heald
Lisa A Rybicki
Mohammed S Orloff
Jin Lian Chen
Xiuli Liu
Lisa Yerian
Joseph Willis
Heli J Lehtonen
Rainer Lehtonen
Jessica L Mester
Jessica Moline
Carol A Burke
James Church
Lauri A Aaltonen
Charis Eng
Cleveland Clinic Lerner College of Medicine · USCleveland Clinic · USUniversity of Helsinki · FIUniversity Hospitals Case Medical Center · US

Funding

Clinical and Translational Science Collaborative of ClevelandUL1TR000439 · NCATS · CASE WESTERN RESERVE UNIVERSITY · PI KONSTAN, MICHAEL W. · 2012 to 2016
$50.0M
Selective Modulation of Thyroidal RadioiodineP01CA124570 · NCI · OHIO STATE UNIVERSITY · PI RINGEL, MATTHEW D · 2008 to 2017
$23.4M
NCATS NIH HHS UL1 TR000439NCI NIH HHS P01 CA124570
6 · The paper itself

Abstract

BACKGROUND &

aimsGastrointestinal polyposis is a common clinical problem, yet there is no consensus on how to best manage patients with moderate-load polyposis. Identifying genetic features of this disorder could improve management and especially surveillance of these patients. We sought to determine the prevalence of hamartomatous polyposis-associated mutations in the susceptibility genes PTEN, BMPR1A, SMAD4, ENG, and STK11 in individuals with ≥5 gastrointestinal polyps, including at least 1 hamartomatous or hyperplastic/serrated polyp.

methodsWe performed a prospective, referral-based study of 603 patients (median age: 51 years; range, 2-89 years) enrolled from June 2006 through January 2012. Genomic DNA was extracted from peripheral lymphocytes and analyzed for specific mutations and large rearrangements in PTEN, BMPR1A, SMAD4, and STK11, as well as mutations in ENG. Recursive partitioning analysis was used to determine cutoffs for continuous variables. The prevalence of mutations was compared using Fisher's exact test. Logistic regression analyses were used to determine univariate and multivariate risk factors.

resultsOf 603 patients, 119 (20%) had a personal history of colorectal cancer and most (n = 461 [76%]) had <30 polyps. Seventy-seven patients (13%) were found to have polyposis-associated mutations, including 11 in ENG (1.8%), 13 in PTEN (2.2%), 13 in STK11 (2.2%), 20 in BMPR1A (3.3%), and 21 in SMAD4 (3.5%). Univariate clinical predictors for risk of having these mutations included age at presentation younger than 40 years (19% vs 10%; P = .008), a polyp burden of ≥30 (19% vs 11%; P = .014), and male sex (16% vs 10%; P = .03). Patients who had ≥1 ganglioneuroma (29% vs 2%; P < .001) or presented with polyps of ≥3 histologic types (20% vs 2%; P = .003) were more likely to have germline mutations in PTEN.

conclusionsAge younger than 40 years, male sex, and specific polyp histologies are significantly associated with risk of germline mutations in hamartomatous-polyposis associated genes. These associations could guide clinical decision making and further investigations.

Indexed as

Germ-Line MutationAdolescentAdultAgedAged, 80 and overAMP-Activated Protein Kinase KinasesAntigens, CDBone Morphogenetic Protein Receptors, Type IChildChild, PreschoolColonic PolypsEndoglinFemaleGenotypeHumansMaleAMP-Activated Protein Kinase KinasesAntigens, CDBMPR1A protein, humanBone Morphogenetic Protein Receptors, Type IEndoglinENG protein, humanProtein Serine-Threonine KinasesPTEN PhosphohydrolasePTEN protein, humanReceptors, Cell SurfaceSmad4 ProteinSMAD4 protein, humanSTK11 protein, human

Identifiers

PMID23399955
PMCPMC3969031
OpenAlexW2004979394

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.