Evidence map›Paper›PMID 23399005›Full record

ArticleParasites & vectors2013

Genetic characterization of Theileria equi infecting horses in North America: evidence for a limited source of U.S. introductions.

Carina M Hall, Joseph D Busch, Glen A Scoles, Kristina A Palma-Cagle, Massaro W Ueti, Lowell S Kappmeyer, David M Wagner

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 70 citations in OpenAlex.

  1. Review
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  6. Revisiting the genotypes ofFrontiers in veterinary science · 2024
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  7. Review
  8. Article
  9. Complete Genome Sequence of Theileria equi NVSL354.Microbiology resource announcements · 2023
    Article
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  11. Article
  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Carina M HallCenter for Microbial Genetics and Genomics, Northern Arizona University, Flagstaff, AZ 86011, USA.
Joseph D Busch
Glen A Scoles
Kristina A Palma-Cagle
Massaro W Ueti
Lowell S Kappmeyer
David M Wagner
Northern Arizona University · USWashington State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTheileria equi is a tick-borne apicomplexan hemoparasite that causes equine piroplasmosis. This parasite has a worldwide distribution but the United States was considered to be free of this disease until recently.

methodsWe used samples from 37 horses to determine genetic relationships among North American T. equi using the 18S rRNA gene and microsatellites. We developed a DNA fingerprinting panel of 18 microsatellite markers using the first complete genome sequence of T. equi.

resultsA maximum parsimony analysis of 18S rRNA sequences grouped the samples into two major clades. The first clade (n = 36) revealed a high degree of nucleotide similarity in U.S. T. equi, with just 0-2 single nucleotide polymorphisms (SNPs) among samples. The remaining sample fell into a second clade that was genetically divergent (48 SNPs) from the other U.S. samples. This sample was collected at the Texas border, but may have originated in Mexico. We genotyped T. equi from the U.S. using microsatellite markers and found a moderate amount of genetic diversity (2-8 alleles per locus). The field samples were mostly from a 2009 Texas outbreak (n = 22) although samples from five other states were also included in this study. Using Weir and Cockerham's FST estimator (θ) we found strong population differentiation of the Texas and Georgia subpopulations (θ = 0.414), which was supported by a neighbor-joining tree created with predominant single haplotypes. Single-clone infections were found in 27 of the 37 samples (73%), allowing us to identify 15 unique genotypes.

conclusionsThe placement of most T. equi into one monophyletic clade by 18S is suggestive of a limited source of introduction into the U.S. When applied to a broader cross section of worldwide samples, these molecular tools should improve source tracking of T. equi outbreaks and may help prevent the spread of this tick-borne parasite.

Indexed as

Genetic VariationAnimalsBase SequenceCoinfectionDNA FingerprintingDNA, ProtozoanGenetic MarkersGenetics, PopulationGenotypeGeorgiaHaplotypesHorse DiseasesHorsesMicrosatellite RepeatsMolecular Sequence DataPhylogenyDNA, ProtozoanGenetic MarkersRNA, ProtozoanRNA, Ribosomal, 18S

Identifiers

PMID23399005
PMCPMC3606381
OpenAlexW2144778388

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.