Evidence map›Paper›PMID 23393189›Full record

ArticleNucleic acids research2013

Pyrvinium pamoate changes alternative splicing of the serotonin receptor 2C by influencing its RNA structure.

Manli Shen, Stanislav Bellaousov, Michael Hiller, Pierre de La Grange, Trevor P Creamer, Orit Malina, Ruth Sperling, David H Mathews, Peter Stoilov, Stefan Stamm

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

  1. Alternative Splicing Regulation in Metabolic Disorders.Obesity reviews : an official journal of the International Association for the Study of Obesity · 2025
    Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. C/D-box snoRNAs form methylating and non-methylating ribonucleoprotein complexes: Old dogs show new tricks.BioEssays : news and reviews in molecular, cellular and developmental biology · 2017
    Review
  8. A short history of the 5-HTPsychopharmacology · 2017
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Manli ShenDepartment of Molecular and Cellular Biochemistry, University of Kentucky, 741 South Limestone, Lexington, KY 40536, USA.
Stanislav Bellaousov
Michael Hiller
Pierre de La Grange
Trevor P Creamer
Orit Malina
Ruth Sperling
David H Mathews
Peter Stoilov
Stefan Stamm
Max Planck Institute for the Physics of Complex Systems · DEMax Planck Institute of Molecular Cell Biology and Genetics · DEUniversity of Kentucky · USHôpital Saint-Louis · FRUniversity of Rochester Medical Center · US

Funding

UNDERSTANDING THE MOLECULAR BASIS OF EPIGENETIC TRANSCRIPTIONAL SILENCINGP20RR020171 · NCRR · UNIVERSITY OF KENTUCKY · PI LOUIS HERSH, LOUIS HERSH LOUIS HERSH · 2004 to 2011
$16.5M
Supporting RNAstructure: Software for RNA AnalysisR01GM076485 · NIGMS · UNIVERSITY OF ROCHESTER · PI MATHEWS, DAVID H. · 2006 to 2021
$4.7M
Regulation of alternative pre-mRNA processing by small nucleolar RNAsR01GM083187 · NIGMS · UNIVERSITY OF KENTUCKY · PI STAMM, STEFAN · 2009 to 2012
$1.1M
NCRR NIH HHS P20RR020171NIGMS NIH HHS R01 GM076485NIGMS NIH HHS R01 GM083187
6 · The paper itself

Abstract

The serotonin receptor 2C plays a central role in mood and appetite control. It undergoes pre-mRNA editing as well as alternative splicing. The RNA editing suggests that the pre-mRNA forms a stable secondary structure in vivo. To identify substances that promote alternative exons inclusion, we set up a high-throughput screen and identified pyrvinium pamoate as a drug-promoting exon inclusion without editing. Circular dichroism spectroscopy indicates that pyrvinium pamoate binds directly to the pre-mRNA and changes its structure. SHAPE (selective 2'-hydroxyl acylation analysed by primer extension) assays show that part of the regulated 5'-splice site forms intramolecular base pairs that are removed by this structural change, which likely allows splice site recognition and exon inclusion. Genome-wide analyses show that pyrvinium pamoate regulates >300 alternative exons that form secondary structures enriched in A-U base pairs. Our data demonstrate that alternative splicing of structured pre-mRNAs can be regulated by small molecules that directly bind to the RNA, which is reminiscent to an RNA riboswitch.

Indexed as

Alternative SplicingBase SequenceExonsHEK293 CellsHigh-Throughput Screening AssaysHumansMolecular Sequence DataNucleic Acid ConformationPhylogenyPyrvinium CompoundsReceptor, Serotonin, 5-HT2CRibonucleoprotein, U1 Small NuclearRNA, Double-StrandedRNA EditingRNA, MessengerRNA PrecursorspyrviniumPyrvinium CompoundsReceptor, Serotonin, 5-HT2CRibonucleoprotein, U1 Small NuclearRNA, Double-StrandedRNA, MessengerRNA Precursors

Identifiers

PMID23393189
PMCPMC3616728
OpenAlexW2124689160

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.