Evidence map›Paper›PMID 23393133›Full record

ArticleThe Journal of biological chemistry2013

Tight conformational coupling between the domains of the enterotoxigenic Escherichia coli fimbrial adhesin CfaE regulates binding state transition.

Yang Liu, Lothar Esser, Gianluca Interlandi, Dagmara I Kisiela, Veronika Tchesnokova, Wendy E Thomas, Evgeni Sokurenko, Di Xia, Stephen J Savarino

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Yang LiuEnteric Diseases Department, Infectious Diseases Directorate, Naval Medical Research Center, Silver Spring, Maryland 20910.
Lothar EsserLaboratory of Cell Biology, Center for Cancer Research, NCI, National Institutes of Health, Bethesda, Maryland 20892.
Gianluca InterlandiDepartment of Engineering, University of Washington, Seattle, Washington 98195.
Dagmara I KisielaDepartment of Microbiology, University of Washington, Seattle, Washington 98195.
Veronika TchesnokovaDepartment of Microbiology, University of Washington, Seattle, Washington 98195.
Wendy E ThomasDepartment of Engineering, University of Washington, Seattle, Washington 98195.
Evgeni SokurenkoDepartment of Microbiology, University of Washington, Seattle, Washington 98195. Electronic address: evs@u.washington.edu.
Di XiaLaboratory of Cell Biology, Center for Cancer Research, NCI, National Institutes of Health, Bethesda, Maryland 20892. Electronic address: dixia@helix.nih.gov.
Stephen J SavarinoEnteric Diseases Department, Infectious Diseases Directorate, Naval Medical Research Center, Silver Spring, Maryland 20910; Department of Pediatrics, Uniformed Services University of the Health Sciences, Bethesda, Maryland 20814. Electronic address: stephen.savarino@med.navy.mil.
University of Washington · USNational Institutes of Health · USNaval Medical Research Command · US

Funding

Dynamic Properties of Bacterial AdhesionsR01AI050940 · NIAID · UNIVERSITY OF WASHINGTON · PI SOKURENKO, EVGENI VENIAMINOVIC · 2002 to 2011
$4.7M
Structural studies of fimbriae of enterotoxigenic E. coli (ETEC)ZIABC010735 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI XIA, DI S · 2009 to 2017
$1.2M
NIAID NIH HHS R01 AI050940
6 · The paper itself

Abstract

CfaE, the tip adhesin of enterotoxigenic Escherichia coli colonization factor antigen I fimbriae, initiates binding of this enteropathogen to the small intestine. It comprises stacked β-sandwich adhesin (AD) and pilin (PD) domains, with the putative receptor-binding pocket at one pole and an equatorial interdomain interface. CfaE binding to erythrocytes is enhanced by application of moderate shear stress. A G168D replacement along the AD facing the CfaE interdomain region was previously shown to decrease the dependence on shear by increasing binding at lower shear forces. To elucidate the structural basis for this functional change, we studied the properties of CfaE G168D (with a self-complemented donor strand) and solved its crystal structure at 2.6 Å resolution. Compared with native CfaE, CfaE G168D showed a downward shift in peak erythrocyte binding under shear stress and greater binding under static conditions. The thermal melting transition of CfaE G168D occurred 10 °C below that of CfaE. Compared with CfaE, the atomic structure of CfaE G168D revealed a 36% reduction in the buried surface area at the interdomain interface. Despite the location of this single modification in the AD, CfaE G168D exhibited structural derangements only in the adjoining PD compared with CfaE. In molecular dynamics simulations, the G168D mutation was associated with weakened interdomain interactions under tensile force. Taken together, these findings indicate that the AD and PD of CfaE are conformationally tightly coupled and support the hypothesis that opening of the interface plays a critical modulatory role in the allosteric activation of CfaE.

Indexed as

Gene Expression RegulationAdhesins, Escherichia coliAllosteric SiteAnimalsAntibodies, MonoclonalCattleCrystallography, X-RayEnterotoxigenic Escherichia coliErythrocytesEscherichia coliEscherichia coli ProteinsFimbriae ProteinsMolecular Dynamics SimulationMutationProtein BindingProtein ConformationAdhesins, Escherichia coliAntibodies, MonoclonalCfaE protein, E colicolonization factor antigensEscherichia coli ProteinsFimbriae Proteins

Identifiers

PMID23393133
PMCPMC3617298
OpenAlexW1979845898

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.