ArticleG3 (Bethesda, Md.)2013
Genetic control and comparative genomic analysis of flowering time in Setaria (Poaceae).
Article in G3 (Bethesda, Md.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.
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Who cites it
42 citing papers in PubMed, 84 citations in OpenAlex.
- Construction of a genetic linkage map and QTL mapping of the agronomic traits in Foxtail millet (Setaria italica).BMC genomics · 2025Article
- Crop Evolution of Foxtail Millet.Plants (Basel, Switzerland) · 2024Review
- Article
- How ambient temperature affects the heading date of foxtail millet (Frontiers in plant science · 2023Article
- Genome-wide identification of quantitative trait loci for morpho-agronomic and yield-related traits in foxtail millet (Setaria italica) across multi-environments.Molecular genetics and genomics : MGG · 2022Article
- Recombinant inbred lines and next-generation sequencing enable rapid identification of candidate genes involved in morphological and agronomic traits in foxtail millet.Scientific reports · 2022Article
- Isolation and identification ofFrontiers in plant science · 2022Article
- Exploring theFrontiers in plant science · 2022Article
- High-depth resequencing of 312 accessions reveals the local adaptation of foxtail millet.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Population genomic structure of Eurasian and African foxtail millet landrace accessions inferred from genotyping-by-sequencing.The plant genome · 2021Article
- Linkage mapping evidence for a syntenic QTL associated with flowering time in perennial CGlobal change biology. Bioenergy · 2021Article
- QTL mapping of yield component traits on bin map generated from resequencing a RIL population of foxtail millet (Setaria italica).BMC genomics · 2020Article
- Barnyard Millet for Food and Nutritional Security: Current Status and Future Research Direction.Frontiers in genetics · 2020Review
- Genome-Wide Association Study of Major Agronomic Traits in Foxtail Millet (Setaria italica L.) Using ddRAD Sequencing.Scientific reports · 2019Article
- Quantitative Trait Locus Mapping for Flowering Time in a Lowland × Upland Switchgrass Pseudo-F2 Population.The plant genome · 2018Article
- Comparative genome-wide characterization leading to simple sequence repeat marker development for Nicotiana.BMC genomics · 2018Article
- Comparative transcriptomic analysis identifies genes responsible for fruit count and oil yield in the oil tea plant Camellia chekiangoleosa.Scientific reports · 2018Article
- Domestication and Improvement in the Model C4 Grass, Setaria.Frontiers in plant science · 2018Review
- Species-Associated Differences in the Below-Ground Microbiomes of Wild and DomesticatedFrontiers in plant science · 2018Article
- Genome-Wide Association Study in Pseudo-FFrontiers in plant science · 2018Article
Corrections and comments
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Authors and funding
6 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We report the first study on the genetic control of flowering in Setaria, a panicoid grass closely related to switchgrass, and in the same subfamily as maize and sorghum. A recombinant inbred line mapping population derived from a cross between domesticated Setaria italica (foxtail millet) and its wild relative Setaria viridis (green millet), was grown in eight trials with varying environmental conditions to identify a small number of quantitative trait loci (QTL) that control differences in flowering time. Many of the QTL across trials colocalize, suggesting that the genetic control of flowering in Setaria is robust across a range of photoperiod and other environmental factors. A detailed comparison of QTL for flowering in Setaria, sorghum, and maize indicates that several of the major QTL regions identified in maize and sorghum are syntenic orthologs with Setaria QTL, although the maize large effect QTL on chromosome 10 is not. Several Setaria QTL intervals had multiple LOD peaks and were composed of multiple syntenic blocks, suggesting that observed QTL represent multiple tightly linked loci. Candidate genes from flowering time pathways identified in rice and Arabidopsis were identified in Setaria QTL intervals, including those involved in the CONSTANS photoperiod pathway. However, only three of the approximately seven genes cloned for flowering time in maize colocalized with Setaria QTL. This suggests that variation in flowering time in separate grass lineages is controlled by a combination of conserved and lineage specific genes.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.