ArticleMolecular biology and evolution2013
AGP: a multimethods web server for alignment-free genome phylogeny.
Article in Molecular biology and evolution, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
9 citing papers in PubMed.
- Article
- Explainable coronary artery disease prediction model based on AutoGluon from AutoML framework.Frontiers in cardiovascular medicine · 2024Article
- Compensatory Base Changes in ITS2 Secondary Structure Alignment, Modelling, and Molecular Phylogeny: An Integrated Approach to Improve Species Delimitation inJournal of fungi (Basel, Switzerland) · 2023Article
- Resolution of deep divergence of club fungi (phylum Basidiomycota).Synthetic and systems biotechnology · 2019Article
- Potential biomarkers of acute myocardial infarction based on weighted gene co-expression network analysis.Biomedical engineering online · 2019Article
- PGAdb-builder: A web service tool for creating pan-genome allele database for molecular fine typing.Scientific reports · 2016Article
- KGCAK: a K-mer based database for genome-wide phylogeny and complexity evaluation.Biology direct · 2015Article
- Article
- CGAP: a new comprehensive platform for the comparative analysis of chloroplast genomes.BMC bioinformatics · 2013Article
Corrections and comments
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Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Phylogenetic analysis based on alignment method meets huge challenges when dealing with whole-genome sequences, for example, recombination, shuffling, and rearrangement of sequences. Thus, various alignment-free methods for phylogeny construction have been proposed. However, most of these methods have not been implemented as tools or web servers. Researchers cannot use these methods easily with their data sets. To facilitate the usage of various alignment-free methods, we implemented most of the popular alignment-free methods and constructed a user-friendly web server for alignment-free genome phylogeny (AGP). AGP integrated the phylogenetic tree construction, visualization, and comparison functions together. Both AGP and all source code of the methods are available at http://www.herbbol.org:8000/agp (last accessed February 26, 2013). AGP will facilitate research in the field of whole-genome phylogeny and comparison.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.