Evidence map›Paper›PMID 23389473›Full record

ArticleRNA (New York, N.Y.)2013

FUS regulates genes coding for RNA-binding proteins in neurons by binding to their highly conserved introns.

Tadashi Nakaya, Panagiotis Alexiou, Manolis Maragkakis, Alexandra Chang, Zissimos Mourelatos

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 108 citations in OpenAlex.

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  11. TheThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
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  15. Modulation of miRISC-Mediated Gene Silencing in Eukaryotes.Frontiers in molecular biosciences · 2022
    Review
  16. Article
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  20. Review

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Tadashi NakayaDepartment of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Panagiotis Alexiou
Manolis Maragkakis
Alexandra Chang
Zissimos Mourelatos
University of Pennsylvania · US

Funding

Genetic Control of RNA metabolism: analysis of the SMARD1 helicaseR01NS056070 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI MOURELATOS, ZISSIMOS · 2008 to 2011
$1.4M
TDP-43 and FUS RNA pathways in motor neuron degenerationR21NS072561 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI MOURELATOS, ZISSIMOS · 2010 to 2011
$436k
NINDS NIH HHS NS056070NINDS NIH HHS NS072561NINDS NIH HHS R01 NS056070NINDS NIH HHS R21 NS072561
6 · The paper itself

Abstract

Dominant mutations and mislocalization or aggregation of Fused in Sarcoma (FUS), an RNA-binding protein (RBP), cause neuronal degeneration in Amyotrophic Lateral Sclerosis (ALS) and Frontotemporal Lobar Degeneration (FTLD), two incurable neurological diseases. However, the function of FUS in neurons is not well understood. To uncover the impact of FUS in the neuronal transcriptome, we used high-throughput sequencing of immunoprecipitated and cross-linked RNA (HITS-CLIP) of FUS in human brains and mouse neurons differentiated from embryonic stem cells, coupled with RNA-seq and FUS knockdowns. We report conserved neuronal RNA targets and networks that are regulated by FUS. We find that FUS regulates splicing of genes coding for RBPs by binding to their highly conserved introns. Our findings have important implications for understanding the impact of FUS in neurodegenerative diseases and suggest that perturbations of FUS can impact the neuronal transcriptome via perturbations of RBP transcripts.

Indexed as

IntronsAmyotrophic Lateral SclerosisAnimalsBase SequenceConserved SequenceFrontotemporal Lobar DegenerationHumansMiceNeuronsRNA-Binding ProteinsTemporal LobeRNA-Binding Proteins

Identifiers

PMID23389473
PMCPMC3677260
OpenAlexW2118922947

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.