Evidence map›Paper›PMID 23389049›Full record

ArticleMolecular & cellular proteomics : MCP2013

Site-specific glycoforms of haptoglobin in liver cirrhosis and hepatocellular carcinoma.

Petr Pompach, Zuzana Brnakova, Miloslav Sanda, Jing Wu, Nathan Edwards, Radoslav Goldman

Abstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed.

  1. Trial
  2. Article
  3. Cryo-EM provides insight into how thebioRxiv : the preprint server for biology · 2026
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  20. Evaluation of Haptoglobin and Its Proteoforms as Glioblastoma Markers.International journal of molecular sciences · 2021
    Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Petr PompachDepartment of Oncology, Georgetown University, Washington, DC 20057, USA.
Zuzana Brnakova
Miloslav Sanda
Jing Wu
Nathan Edwards
Radoslav Goldman

Funding

Tissue Culture Shared ResourceP30CA051008 · NCI · GEORGETOWN UNIVERSITY · PI STEPHEN W BYERS · 1990 to 2026
$71.5M
Glycans in Hepatocellular CarcinomaR01CA135069 · NCI · GEORGETOWN UNIVERSITY · PI GOLDMAN, RADOSLAV · 2009 to 2019
$4.1M
Alliance of Glycobiologists for Detection of CancerU01CA168926 · NCI · GEORGETOWN UNIVERSITY · PI GOLDMAN, RADOSLAV · 2012 to 2016
$2.0M
Proteomic Analysis of Serum in Liver CancerR01CA115625 · NCI · GEORGETOWN UNIVERSITY · PI GOLDMAN, RADOSLAV · 2007 to 2010
$1.4M
NCI NIH HHS P30 CA051008NCI NIH HHS P30 CA51008NCI NIH HHS R01 CA115625NCI NIH HHS R01 CA135069NCI NIH HHS U01 CA168926
6 · The paper itself

Abstract

Haptoglobin is a liver-secreted glycoprotein with four N-glycosylation sites. Its glycosylation was reported to change in several cancer diseases, which prompted us to examine site-specific glycoforms of haptoglobin in liver cirrhosis and hepatocellular carcinoma. To this end, we have used two-dimensional separation composed of hydrophilic interaction and nano-reverse phase chromatography coupled to QTOF mass spectrometry of the enriched glycopeptides. Our results show increased fucosylation of haptoglobin in liver disease with up to six fucoses associated with specific glycoforms of one glycopeptide. Structural analysis using exoglycosidase treatment and MALDI-MS/MS of detached permethylated glycans led to the identification of Lewis Y-type structures observed particularly in the pooled hepatocellular carcinoma sample. To confirm the increase of the Lewis Y structures observed by LC-MS, we have used immunoaffinity detection with Lewis Y-specific antibodies. The presence of multiply fucosylated Lewis Y glycoforms of haptoglobin in the disease context could have important functional implications.

Indexed as

Protein Processing, Post-TranslationalAmino Acid SequenceCarbohydrate ConformationCarbohydrate SequenceCarcinoma, HepatocellularCase-Control StudiesFucoseGlycosylationHaptoglobinsHumansLiver CirrhosisLiver NeoplasmsMolecular Sequence DataFucoseHaptoglobinsHP protein, human

Identifiers

PMID23389049
PMCPMC3650339

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.