Evidence map›Paper›PMID 23383646›Full record

ArticleBiochemistry2013

The Qdot-labeled actin super-resolution motility assay measures low-duty cycle muscle myosin step size.

Yihua Wang, Katalin Ajtai, Thomas P Burghardt

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Review
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  9. Review
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  14. In vitro and in vivo single myosin step-sizes in striated muscle.Journal of muscle research and cell motility · 2015
    Article
  15. Article
  16. Article
  17. Ventricular myosin modifies in vitro step-size when phosphorylated.Journal of molecular and cellular cardiology · 2014
    Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yihua WangDepartment of Biochemistry and Molecular Biology, Mayo Clinic Rochester, Rochester, Minnesota 55905, USA.
Katalin Ajtai
Thomas P Burghardt
Mayo Clinic · US

Funding

Visualizing Actomyosin Transients by Data MergingR01AR049277 · NIAMS · MAYO CLINIC ROCHESTER · PI BURGHARDT, THOMAS P · 2004 to 2013
$3.2M
In Situ Sensing of Single Myosin Function in Hypertrophy DiseaseR01HL095572 · NHLBI · MAYO CLINIC ROCHESTER · PI BURGHARDT, THOMAS P · 2010 to 2013
$1.5M
NHLBI NIH HHS R01 HL095572NHLBI NIH HHS R01HL095572NIAMS NIH HHS R01 AR049277NIAMS NIH HHS R01AR049277
6 · The paper itself

Abstract

Myosin powers contraction in heart and skeletal muscle and is a leading target for mutations implicated in inheritable muscle diseases. During contraction, myosin transduces ATP free energy into the work of muscle shortening against resisting force. Muscle shortening involves relative sliding of myosin and actin filaments. Skeletal actin filaments were fluorescently labeled with a streptavidin conjugate quantum dot (Qdot) binding biotin-phalloidin on actin. Single Qdots were imaged in time with total internal reflection fluorescence microscopy and then spatially localized to 1-3 nm using a super-resolution algorithm as they translated with actin over a surface coated with skeletal heavy meromyosin (sHMM) or full-length β-cardiac myosin (MYH7). The average Qdot-actin velocity matches measurements with rhodamine-phalloidin-labeled actin. The sHMM Qdot-actin velocity histogram contains low-velocity events corresponding to actin translation in quantized steps of ~5 nm. The MYH7 velocity histogram has quantized steps at 3 and 8 nm in addition to 5 nm and larger compliance compared to that of sHMM depending on the MYH7 surface concentration. Low-duty cycle skeletal and cardiac myosin present challenges for a single-molecule assay because actomyosin dissociates quickly and the freely moving element diffuses away. The in vitro motility assay has modestly more actomyosin interactions, and methylcellulose inhibited diffusion to sustain the complex while preserving a subset of encounters that do not overlap in time on a single actin filament. A single myosin step is isolated in time and space and then characterized using super-resolution. The approach provides a quick, quantitative, and inexpensive step size measurement for low-duty cycle muscle myosin.

Indexed as

Quantum DotsActinsAlgorithmsAnimalsFluorescent DyesMethylcelluloseMicroscopy, FluorescenceMuscle, SkeletalMyocardiumMyosin Heavy ChainsMyosin SubfragmentsPhalloidineRabbitsRhodaminesStaining and LabelingSwineActinsFluorescent DyesMethylcelluloseMyosin Heavy ChainsMyosin SubfragmentsPhalloidinerhodamine-phalloidinRhodamines

Identifiers

PMID23383646
PMCPMC3616449
OpenAlexW2036104448

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.