Evidence map›Paper›PMID 23383270›Full record

ArticlePloS one2013

HuD promotes BDNF expression in brain neurons via selective stabilization of the BDNF long 3'UTR mRNA.

Megan Allen, Clark Bird, Wei Feng, Guanglu Liu, Wenqi Li, Nora I Perrone-Bizzozero, Yue Feng

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 63 citations in OpenAlex.

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  8. From form to function: mAdvances in biological regulation · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Megan AllenDepartment of Pharmacology, Emory University School of Medicine, Atlanta, Georgia, United States of America.
Clark Bird
Wei Feng
Guanglu Liu
Wenqi Li
Nora I Perrone-Bizzozero
Yue Feng
Emory University · USUniversity of New Mexico · US

Funding

Training Program in Biochemistry, Cell and Molecular BiologyT32GM008367 · NIGMS · EMORY UNIVERSITY · PI BOISE, LAWRENCE H., CORBETT, ANITA H. · 1990 to 2019
$5.6M
Graduate Training in the Pharmacological StudiesT32GM008602 · NIGMS · EMORY UNIVERSITY · PI HALL, RANDY A. · 1996 to 2021
$5.1M
Mechanisms of Post-Transcriptional Control of Neuronal mRNAsR01NS030255 · NINDS · UNIVERSITY OF NEW MEXICO · PI PERRONE-BIZZOZERO, NORA IRMA · 1997 to 2011
$2.8M
Competing roles of microRNAs and RNA-binding proteins in drug addictionR01DA034097 · NIDA · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI NEISEWANDER, JANET L, PERRONE-BIZZOZERO, NORA IRMA · 2012 to 2016
$2.2M
Translation regulation of BDNF in brain functionR01NS070526 · NINDS · EMORY UNIVERSITY · PI FENG, YUE · 2011 to 2015
$1.8M
Impact of miR-495 vs. HuD in the Control of Addiction-Related Genes and BehaviorR21DA034452 · NIDA · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI PERRONE-BIZZOZERO, NORA IRMA · 2012 to 2013
$370k
NIDA NIH HHS 1R01DA034097NIDA NIH HHS R01 DA034097NIDA NIH HHS R21 DA034452NIGMS NIH HHS 5T32GM008602NIGMS NIH HHS T32 GM008367NIGMS NIH HHS T32 GM008602NINDS NIH HHS 5R01NS030255NINDS NIH HHS 5R01NS070526NINDS NIH HHS R01 NS030255NINDS NIH HHS R01 NS070526
6 · The paper itself

Abstract

Complex regulation of brain-derived neurotrophic factor (BDNF) governs its intricate functions in brain development and neuronal plasticity. Besides tight transcriptional control from multiple distinct promoters, alternative 3'end processing of the BDNF transcripts generates either a long or a short 3'untranslated region (3'UTR). Previous reports indicate that distinct RNA sequence in the BDNF 3'UTRs differentially regulates BDNF production in the brain to accommodate neuronal activity changes, conceivably through differential interactions with undefined trans-acting factors that regulate stability and translation of these BDNF mRNA isoforms. In this study, we report that the neuronal RNA-binding protein (RBP) HuD interacts with a highly conserved AU-rich element (ARE) specifically located in the BDNF long 3'UTR. Such interaction is necessary and sufficient for selective stabilization of mRNAs that contain the BDNF long 3'UTR in vitro and in vivo. Moreover, in a HuD transgenic mouse model, the BDNF long 3'UTR mRNA is increased in the hippocampal dentate granule cells (DGCs), leading to elevated expression of BDNF protein that is transported and stored in the mossy fiber (MF) terminals. Our results identify HuD as the first trans-acting factor that enhances BDNF expression specifically through the long 3'UTR and a novel mechanism that regulates BDNF protein production in selected neuronal populations by HuD abundance.

Indexed as

3' Untranslated RegionsRNA StabilityAnimalsBase SequenceBrainBrain-Derived Neurotrophic FactorCells, CulturedELAV ProteinsGene Expression RegulationGenes, ReporterHippocampusMiceNeuronsProtein BindingResponse ElementsRNA Interference3' Untranslated RegionsBrain-Derived Neurotrophic FactorELAV ProteinsRNA, Messenger

Identifiers

PMID23383270
PMCPMC3561324
OpenAlexW2074989479

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.