Evidence map›Paper›PMID 23383111›Full record

ArticlePloS one2013

No effect of genome-wide copy number variation on measures of intelligence in a New Zealand birth cohort.

Andrew T M Bagshaw, L John Horwood, Youfang Liu, David M Fergusson, Patrick F Sullivan, Martin A Kennedy

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Andrew T M BagshawDepartment of Pathology, University of Otago, Christchurch, New Zealand. andrew.bagshaw@gmail.com
L John Horwood
Youfang Liu
David M Fergusson
Patrick F Sullivan
Martin A Kennedy
University of Otago · NZUniversity of North Carolina at Chapel Hill · US

Funding

Uncovering and confirming gene-environment interactions in psychopathologyR01MH077874 · NIMH · DUKE UNIVERSITY · PI CASPI, AVSHALOM · 2007 to 2010
$1.6M
A Developmental Model of Gene-Environment Interplay in SUDsR01DA024413 · NIDA · DUKE UNIVERSITY · PI COSTELLO, ELIZABETH JANE · 2011 to 2011
$1.2M
NIDA NIH HHS R01 DA024413NIDA NIH HHS R01DA024413NIMH NIH HHS MH077874NIMH NIH HHS R01 MH077874
6 · The paper itself

Abstract

Variation in human intelligence is approximately 50% heritable, but understanding of the genes involved is limited. Several forms of genetic variation remain under-studied in relation to intelligence, one of which is copy number variation (CNV). Using single-nucleotide polymorphism (SNP) -based microarrays, we genotyped CNVs genome-wide in a birth cohort of 723 New Zealanders, and correlated them with four intelligence-related phenotypes. We found no significant association for any common CNV after false discovery correction, which is consistent with previous work. In contrast to a previous study, however, we found no effect on any cognitive measure of rare CNV burden, defined as total number of bases inserted or deleted in CNVs rarer than 5%. We discuss possible reasons for this failure to replicate, including interaction between CNV and aging in determining the effects of rare CNVs. While our results suggest that no CNV assayable by SNP chips contributes more than a very small amount to variation in human intelligence, it remains possible that common CNVs in segmental duplication arrays, which are not well covered by SNP chips, are important contributors.

Indexed as

DNA Copy Number VariationsGenome, HumanGenome-Wide Association StudyHumansIntelligence TestsMicroarray AnalysisNew ZealandPolymorphism, Single Nucleotide

Identifiers

PMID23383111
PMCPMC3559383
OpenAlexW2004877079

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.