Evidence map›Paper›PMID 23383084›Full record

ArticlePloS one2013

Characterization of the distal promoter of the human pyruvate carboxylase gene in pancreatic beta cells.

Ansaya Thonpho, Pinnara Rojvirat, Sarawut Jitrapakdee, Michael J MacDonald

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
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  4. Review
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  11. Regulation of pyruvate metabolism in metabolic-related diseases.Reviews in endocrine & metabolic disorders · 2014
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ansaya ThonphoMolecular Metabolism Research Group, Department of Biochemistry, Faculty of Science, Mahidol University, Bangkok, Thailand.
Pinnara Rojvirat
Sarawut Jitrapakdee
Michael J MacDonald
Mahidol University · TH

Funding

GLUCOSE/SECRETAGOGUE METABOLISM IN PANCREATIC ISLETSR01DK028348 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI MACDONALD, MICHAEL JOHN · 1986 to 2013
$7.0M
GLUCOSE/SECRETAGOGUE METABOLISM IN PANCREATIC ISLETSR55DK028348 · NIDDK · UNIVERSITY OF WISCONSIN MADISON · PI MACDONALD, MICHAEL JOHN · 1992 to 1992
–
NIDDK NIH HHS DK28348NIDDK NIH HHS R01 DK028348
6 · The paper itself

Abstract

Pyruvate carboxylase (PC) is an enzyme that plays a crucial role in many biosynthetic pathways in various tissues including glucose-stimulated insulin secretion. In the present study, we identify promoter usage of the human PC gene in pancreatic beta cells. The data show that in the human, two alternative promoters, proximal and distal, are responsible for the production of multiple mRNA isoforms as in the rat and mouse. RT-PCR analysis performed with cDNA prepared from human liver and islets showed that the distal promoter, but not the proximal promoter, of the human PC gene is active in pancreatic beta cells. A 1108 bp fragment of the human PC distal promoter was cloned and analyzed. It contains no TATA box but possesses two CCAAT boxes, and other putative transcription factor binding sites, similar to those of the distal promoter of rat PC gene. To localize the positive regulatory region in the human PC distal promoter, 5'-truncated and the 25-bp and 15-bp internal deletion mutants of the human PC distal promoter were generated and used in transient transfections in INS-1 832/13 insulinoma and HEK293T (kidney) cell lines. The results indicated that positions -340 to -315 of the human PC distal promoter serve as (an) activator element(s) for cell-specific transcription factor, while the CCAAT box at -71/-67, a binding site for nuclear factor Y (NF-Y), as well as a GC box at -54/-39 of the human PC distal promoter act as activator sequences for basal transcription.

Indexed as

Promoter Regions, GeneticAnimalsBase SequenceCloning, MolecularHEK293 CellsHumansInsulin-Secreting CellsMiceMolecular Sequence DataOrgan SpecificityPyruvate CarboxylaseRatsSequence AlignmentTranscription, GeneticPyruvate Carboxylase

Identifiers

PMID23383084
PMCPMC3559343
OpenAlexW2003701477

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.