Evidence map›Paper›PMID 23382903›Full record

ArticlePloS one2013

A non-classical LysR-type transcriptional regulator PA2206 is required for an effective oxidative stress response in Pseudomonas aeruginosa.

F Jerry Reen, Jill M Haynes, Marlies J Mooij, Fergal O'Gara

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. High affinity iron uptake by pyoverdine in Pseudomonas aeruginosa involves multiple regulators besides Fur, PvdS, and FpvI.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2023
    Review
  7. BosR: A novel biofilm-specific regulator inFrontiers in microbiology · 2022
    Article
  8. Article
  9. Article
  10. Oxidative Stress Response inPathogens (Basel, Switzerland) · 2021
    Review
  11. Article
  12. Zebrafish Embryo Infection Model to InvestigateFrontiers in cellular and infection microbiology · 2021
    Review
  13. Review
  14. Article
  15. Article
  16. mBio · 2018
    Article
  17. The XRE Family Transcriptional Regulator SrtR inFrontiers in cellular and infection microbiology · 2018
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 2 countries.

F Jerry ReenBIOMERIT Research Centre, Department of Microbiology, University College Cork, Cork, Ireland.
Jill M Haynes
Marlies J Mooij
Fergal O'Gara
University College Cork · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

LysR-type transcriptional regulators (LTTRs) are emerging as key circuit components in regulating microbial stress responses and are implicated in modulating oxidative stress in the human opportunistic pathogen Pseudomonas aeruginosa. The oxidative stress response encapsulates several strategies to overcome the deleterious effects of reactive oxygen species. However, many of the regulatory components and associated molecular mechanisms underpinning this key adaptive response remain to be characterised. Comparative analysis of publically available transcriptomic datasets led to the identification of a novel LTTR, PA2206, whose expression was altered in response to a range of host signals in addition to oxidative stress. PA2206 was found to be required for tolerance to H(2)O(2)in vitro and lethality in vivo in the Zebrafish embryo model of infection. Transcriptomic analysis in the presence of H(2)O(2) showed that PA2206 altered the expression of 58 genes, including a large repertoire of oxidative stress and iron responsive genes, independent of the master regulator of oxidative stress, OxyR. Contrary to the classic mechanism of LysR regulation, PA2206 did not autoregulate its own expression and did not influence expression of adjacent or divergently transcribed genes. The PA2214-15 operon was identified as a direct target of PA2206 with truncated promoter fragments revealing binding to the 5'-ATTGCCTGGGGTTAT-3' LysR box adjacent to the predicted -35 region. PA2206 also interacted with the pvdS promoter suggesting a global dimension to the PA2206 regulon, and suggests PA2206 is an important regulatory component of P. aeruginosa adaptation during oxidative stress.

Indexed as

Oxidative StressAnimalsBacterial ProteinsBase SequenceConsensus SequenceGene Expression ProfilingGene Expression Regulation, BacterialGene OrderHydrogen PeroxidePromoter Regions, GeneticProtein BindingPseudomonas aeruginosaPseudomonas InfectionsTrans-ActivatorsTranscription FactorsTranscription, GeneticBacterial ProteinsHydrogen PeroxideOxyR protein, Pseudomonas aeruginosaTrans-ActivatorsTranscription FactorsVitamin K 3

Identifiers

PMID23382903
PMCPMC3557286
OpenAlexW2034556100

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.