ArticlePloS one2013
Genome anchored QTLs for biomass productivity in hybrid Populus grown under contrasting environments.
Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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14 citing papers in PubMed, 23 citations in OpenAlex.
- An ultra-dense linkage map identified quantitative trait loci corresponding to fruit quality- and size-related traits in red goji berry.Frontiers in plant science · 2024Article
- Construction of a high-density genetic map using specific-length amplified fragment markers and identification of QTLs for branching angle in poplar.Molecular genetics and genomics : MGG · 2022Article
- Taro Genome Assembly and Linkage Map Reveal QTLs for Resistance to Taro Leaf Blight.G3 (Bethesda, Md.) · 2020Article
- Construction of a high-density genetic map and QTL mapping of leaf traits and plant growth in an interspecific FBMC plant biology · 2019Article
- Genome Wide Associations of Growth, Phenology, and Plasticity Traits in Willow [Frontiers in plant science · 2019Article
- Construction of a high-density genetic map and its application for leaf shape QTL mapping in poplar.Planta · 2018Article
- Genotypic variation in transpiration of coppiced poplar during the third rotation of a short-rotation bio-energy culture.Global change biology. Bioenergy · 2018Article
- Article
- Quantitative trait locus mapping of Populus bark features and stem diameter.BMC plant biology · 2017Article
- Genetics of phenotypic plasticity and biomass traits in hybrid willows across contrasting environments and years.Annals of botany · 2017Article
- QTL Mapping for Pest and Disease Resistance in Cassava and Coincidence of Some QTL with Introgression Regions Derived fromFrontiers in plant science · 2017Article
- Article
- Article
- Genetic mapping of quantitative trait loci underlying flowering time in chrysanthemum (Chrysanthemum morifolium).PloS one · 2013Article
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7 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Traits related to biomass production were analyzed for the presence of quantitative trait loci (QTLs) in a Populus trichocarpa × P. deltoides F(2) population. A genetic linkage map composed of 841 SSR, AFLP, and RAPD markers and phenotypic data from 310 progeny were used to identify genomic regions harboring biomass QTLs. Twelve intervals were identified, of which BM-1, BM-2, and BM-7 were identified in all three years for both height and diameter. One putative QTL, BM-7, and one suggestive QTL exhibited significant evidence of over-dominance in all three years for both traits. Conversely, QTLs BM-4 and BM-6 exhibited evidence of under-dominance in both environments for height and diameter. Seven of the nine QTLs were successfully anchored, and QTL peak positions were estimated for each one on the P. trichocarpa genome assembly using flanking SSR markers with known physical positions. Of the 3,031 genes located in genome-anchored QTL intervals, 1,892 had PFAM annotations. Of these, 1,313, representing 255 unique annotations, had at least one duplicate copy in a QTL interval identified on a separate scaffold. This observation suggests that some QTLs identified in this study may have shared the same ancestral sequence prior to the salicoid genome duplication in Populus.
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