Evidence map›Paper›PMID 23382822›Full record

ArticlePloS one2013

Exoproteome and secretome derived broad spectrum novel drug and vaccine candidates in Vibrio cholerae targeted by Piper betel derived compounds.

Debmalya Barh, Neha Barve, Krishnakant Gupta, Sudha Chandra, Neha Jain, Sandeep Tiwari, Nidia Leon-Sicairos, Adrian Canizalez-Roman, Anderson Rodrigues dos Santos, Syed Shah Hassan and 13 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 131 citations in OpenAlex.

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  15. In silico designing of multi-epitope vaccine against canine parvovirus using reverse vaccinology.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
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11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 8 institutions in 4 countries.

Debmalya BarhCentre for Genomics and Applied Gene Technology, Institute of Integrative Omics and Applied Biotechnology (IIOAB), Nonakuri, Purba Medinipur, West Bengal, India. dr.barh@gmail.com
Neha Barve
Krishnakant Gupta
Sudha Chandra
Neha Jain
Sandeep Tiwari
Nidia Leon-Sicairos
Adrian Canizalez-Roman
Anderson Rodrigues dos Santos
Syed Shah Hassan
Síntia Almeida
Rommel Thiago Jucá Ramos
Vinicius Augusto Carvalho de Abreu
Adriana Ribeiro Carneiro
Siomar de Castro Soares
Thiago Luiz de Paula Castro
Anderson Miyoshi
Artur Silva
Anil Kumar
Amarendra Narayan Misra
Kenneth Blum
Eric R Braverman
Vasco Azevedo
Universidade Federal de Minas Gerais · BRInstitute of Bioinformatics and Applied Biotechnology · INUniversidade Federal do Pará · BRAutonomous University of Sinaloa · MXDevi Ahilya Vishwavidyalaya · INCentral University of Jharkhand · INCornell University · USUniversity of Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vibrio cholerae is the causal organism of the cholera epidemic, which is mostly prevalent in developing and underdeveloped countries. However, incidences of cholera in developed countries are also alarming. Because of the emergence of new drug-resistant strains, even though several generic drugs and vaccines have been developed over time, Vibrio infections remain a global health problem that appeals for the development of novel drugs and vaccines against the pathogen. Here, applying comparative proteomic and reverse vaccinology approaches to the exoproteome and secretome of the pathogen, we have identified three candidate targets (ompU, uppP and yajC) for most of the pathogenic Vibrio strains. Two targets (uppP and yajC) are novel to Vibrio, and two targets (uppP and ompU) can be used to develop both drugs and vaccines (dual targets) against broad spectrum Vibrio serotypes. Using our novel computational approach, we have identified three peptide vaccine candidates that have high potential to induce both B- and T-cell-mediated immune responses from our identified two dual targets. These two targets were modeled and subjected to virtual screening against natural compounds derived from Piper betel. Seven compounds were identified first time from Piper betel to be highly effective to render the function of these targets to identify them as emerging potential drugs against Vibrio. Our preliminary validation suggests that these identified peptide vaccines and betel compounds are highly effective against Vibrio cholerae. Currently we are exhaustively validating these targets, candidate peptide vaccines, and betel derived lead compounds against a number of Vibrio species.

Indexed as

Drug DiscoveryCholeraEpitopes, T-LymphocyteHumansLigandsPiper betleProteomeSmall Molecule LibrariesVaccines, SubunitVibrio choleraeEpitopes, T-LymphocyteLigandsProteomeSmall Molecule LibrariesVaccines, Subunit

Identifiers

PMID23382822
PMCPMC3559646
OpenAlexW1998661009

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.