Evidence map›Paper›PMID 23382750›Full record

ArticleAfrican health sciences2012

Modern lineages of Mycobacterium tuberculosis in Addis Ababa, Ethiopia: implications for the tuberculosis control programe.

A Mihret, Y Bekele, M Aytenew, Y Assefa, M Abebe, L Wassie, G A Loxton, L Yamuah, A Aseffa, G Walzl and 1 more

Open access · hybridAbstract read
In one paragraph

Article in African health sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

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  3. Spoligotyping of Clinical Isolates ofFrontiers in public health · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

A MihretArmauer Hansen Research Institute, Addis Ababa, Ethiopia. adane_mihret@yahoo.com
Y Bekele
M Aytenew
Y Assefa
M Abebe
L Wassie
G A Loxton
L Yamuah
A Aseffa
G Walzl
R Howe
Armauer Hansen Research Institute · ETStellenbosch University · ZA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe genotyping of Mycobacterium tuberculosis strains is important to have unique insights into the dissemination dynamics and evolutionary genetics of this pathogen and for TB control as it allows the detection of suspected outbreaks and the tracing of transmission chains.

objectiveTo characterize M. tuberculois isolates collected from newly diagnosed pulmonary TB patients in Addis Ababa

methodsOne hundred and ninety two sputum samples were cultured on Löwenstein-Jensen (LJ) slants and isolates were heat killed for molecular genotyping. The isolates were characterized using spoligotyping and were compared with the International SpoIDB4 database.

resultT genotype constitutes the most predominant in our study (95, 49.5%) followed by the CAS genotype (42, 21.9%). Other genotypes found were Haarlem (H) (24, 12.5%), the LAM (3, 1.5%), the Beijing genotype (1, 0.5%); four (2.1%) isolates were designated as Unknown.

conclusionAll the isolates belong to the modern lineage and there is high clustering in the genotype of isolates which indicated the presence of recent TB transmission. Therefore, the Tuberculosis Control Programme needs to do more in advocating and strengthening the health system for early detection and treatment of active TB cases as delay in treatment is the key factor in disease transmission.

Indexed as

Genetic VariationGenotypeAdolescentAdultAgedCD4 Lymphocyte CountCluster AnalysisEthiopiaFemaleGenotyping TechniquesHumansMaleMiddle AgedMycobacterium tuberculosisPolymerase Chain ReactionPolymorphism, Restriction Fragment LengthgenotypeMycobacteriumrecent transmissionspoligotyping

Identifiers

PMID23382750
PMCPMC3557690
OpenAlexW1964657494

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.