Evidence map›Paper›PMID 23382704›Full record

ArticlePLoS genetics2013

Nkx6.1 controls a gene regulatory network required for establishing and maintaining pancreatic Beta cell identity.

Ashleigh E Schaffer, Brandon L Taylor, Jacqueline R Benthuysen, Jingxuan Liu, Fabrizio Thorel, Weiping Yuan, Yang Jiao, Klaus H Kaestner, Pedro L Herrera, Mark A Magnuson and 2 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 142 papers.

0numbers the graph read from it
0cells of the map it votes in
142citing papers in PubMed
18.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

142 citing papers in PubMed, 250 citations in OpenAlex.

  1. Review
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  4. Chicoric acid-rich extract ofFrontiers in pharmacology · 2026
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  14. β-Cell Regeneration Is Driven by Pancreatic Plasticity.Advances in anatomy, embryology, and cell biology · 2024
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

82 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Ashleigh E SchafferDepartment of Pediatrics and Cellular and Molecular Medicine, University of California San Diego, La Jolla, California, United States of America.
Brandon L Taylor
Jacqueline R Benthuysen
Jingxuan Liu
Fabrizio Thorel
Weiping Yuan
Yang Jiao
Klaus H Kaestner
Pedro L Herrera
Mark A Magnuson
Catherine Lee May
Maike Sander
University of California, San Diego · USChildren's Hospital of Philadelphia · USUniversity of Geneva · CHUniversity of Pennsylvania · USVanderbilt University · US

Funding

Coordinating Center for Beta Cell Biology ConsortiumU01DK072473 · NIDDK · VANDERBILT UNIVERSITY · PI MAGNUSON, MARK A · 2005 to 2014
$61.0M
Training Program in Basic Clinical GeneticsT32GM008666 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 1998 to 2021
$8.6M
Nkx6 gene function in pancreas developmentR01DK068471 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI WORTHAM, MATTHEW · 2004 to 2024
$6.6M
Pancreatic endocrine development and regenerationU19DK072495 · NIDDK · HAGEDORN RESEARCH INSTITUTE · PI SERUP, PALLE · 2005 to 2009
$5.6M
TRANSCRIPTIONAL CONTROL OF PANCREATIC DEVELOPMENTR01DK055342 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI KAESTNER, KLAUS H · 1998 to 2013
$4.7M
Epigenetic strategies for the in vitro generation of replacement beta cellsU01DK089567 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SANDER, MAIKE · 2010 to 2013
$4.7M
Transcriptional Regulation of Pancreas Development and FunctionR01DK078606 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI MAY, CATHERINE LEE · 2008 to 2012
$2.6M
Epigenomics of the regenerating and aging beta-cellU01DK089529 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI KAESTNER, KLAUS H · 2010 to 2013
$1.8M
Beta Cell Regeneration by Reprogramming of Adult Pancreatic CellsU01DK089566 · NIDDK · UNIVERSITY OF GENEVA · PI HERRERA, PEDRO L · 2010 to 2014
$1.0M
Transcriptional Regulation of Pancreas Development and FunctionR56DK078606 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI MAY, CATHERINE LEE · 2007 to 2007
$124k
NIDDK NIH HHS NIH DK078606NIDDK NIH HHS R01 DK055342NIDDK NIH HHS R01-DK055342NIDDK NIH HHS R01 DK068471NIDDK NIH HHS R01-DK068471NIDDK NIH HHS R01 DK078606NIDDK NIH HHS R56 DK078606NIDDK NIH HHS U01 DK072473NIDDK NIH HHS U01-DK072473NIDDK NIH HHS U01 DK089529NIDDK NIH HHS U01-DK089529NIDDK NIH HHS U01 DK089566NIDDK NIH HHS U01-DK089566NIDDK NIH HHS U01 DK089567NIDDK NIH HHS U01-DK089567NIDDK NIH HHS U19 DK072495NIDDK NIH HHS U19-DK072495NIGMS NIH HHS T32 GM008666
6 · The paper itself

Abstract

All pancreatic endocrine cell types arise from a common endocrine precursor cell population, yet the molecular mechanisms that establish and maintain the unique gene expression programs of each endocrine cell lineage have remained largely elusive. Such knowledge would improve our ability to correctly program or reprogram cells to adopt specific endocrine fates. Here, we show that the transcription factor Nkx6.1 is both necessary and sufficient to specify insulin-producing beta cells. Heritable expression of Nkx6.1 in endocrine precursors of mice is sufficient to respecify non-beta endocrine precursors towards the beta cell lineage, while endocrine precursor- or beta cell-specific inactivation of Nkx6.1 converts beta cells to alternative endocrine lineages. Remaining insulin(+) cells in conditional Nkx6.1 mutants fail to express the beta cell transcription factors Pdx1 and MafA and ectopically express genes found in non-beta endocrine cells. By showing that Nkx6.1 binds to and represses the alpha cell determinant Arx, we identify Arx as a direct target of Nkx6.1. Moreover, we demonstrate that Nkx6.1 and the Arx activator Isl1 regulate Arx transcription antagonistically, thus establishing competition between Isl1 and Nkx6.1 as a critical mechanism for determining alpha versus beta cell identity. Our findings establish Nkx6.1 as a beta cell programming factor and demonstrate that repression of alternative lineage programs is a fundamental principle by which beta cells are specified and maintained. Given the lack of Nkx6.1 expression and aberrant activation of non-beta endocrine hormones in human embryonic stem cell (hESC)-derived insulin(+) cells, our study has significant implications for developing cell replacement therapies.

Indexed as

Endocrine CellsHomeodomain ProteinsInsulinInsulin-Secreting CellsAnimalsCell- and Tissue-Based TherapyCell DifferentiationCell LineageGene Expression Regulation, DevelopmentalGene Regulatory NetworksHumansInsulin SecretionMaf Transcription Factors, LargeMicePancreasStem CellsARX protein, mouseHomeodomain ProteinsInsulinMafa protein, mouseMaf Transcription Factors, LargeNkx6-1 protein, mousepancreatic and duodenal homeobox 1 proteinTrans-ActivatorsTranscription Factors

Identifiers

PMID23382704
PMCPMC3561089
OpenAlexW2016127324

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.