Evidence map›Paper›PMID 23382692›Full record

ArticlePLoS genetics2013

HIF- and non-HIF-regulated hypoxic responses require the estrogen-related receptor in Drosophila melanogaster.

Yan Li, Divya Padmanabha, Luciana B Gentile, Catherine I Dumur, Robert B Beckstead, Keith D Baker

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
10.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 109 citations in OpenAlex.

  1. Structural modeling supports an interaction between thebioRxiv : the preprint server for biology · 2026
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  2. Transcriptional Control of Lipid Metabolism.Advances in experimental medicine and biology · 2026
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  14. Innately expressed estrogen-related receptors in the skeletal muscle are indispensable for exercise fitness.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2023
    Article
  15. Review
  16. Article
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  18. Assessing the PThe Science of the total environment · 2022
    Article
  19. Article
  20. Estrogen-related receptor α is involved in angiogenesis and skeletal muscle revascularization in hindlimb ischemia.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yan LiDepartment of Biochemistry and Molecular Biology and the Massey Cancer Center, Virginia Commonwealth University School of Medicine, Richmond, Virginia, United States of America.
Divya Padmanabha
Luciana B Gentile
Catherine I Dumur
Robert B Beckstead
Keith D Baker
Virginia Commonwealth University · USUniversity of Georgia · US

Funding

VCU Building Interdisciplinary Research Careers in Women's HealthK12HD055881 · NICHD · VIRGINIA COMMONWEALTH UNIVERSITY · PI STRAUSS, JEROME F · 2007 to 2011
$2.5M
The role of Drosophila ERR in the hypoxic responseR56DK090984 · NIDDK · VIRGINIA COMMONWEALTH UNIVERSITY · PI BAKER, KEITH D · 2010 to 2010
$374k
NICHD NIH HHS 5K12HD055881NICHD NIH HHS K12 HD055881NIDDK NIH HHS 1R56DK090984NIDDK NIH HHS R56 DK090984
6 · The paper itself

Abstract

Low-oxygen tolerance is supported by an adaptive response that includes a coordinate shift in metabolism and the activation of a transcriptional program that is driven by the hypoxia-inducible factor (HIF) pathway. The precise contribution of HIF-1a in the adaptive response, however, has not been determined. Here, we investigate how HIF influences hypoxic adaptation throughout Drosophila melanogaster development. We find that hypoxic-induced transcriptional changes are comprised of HIF-dependent and HIF-independent pathways that are distinct and separable. We show that normoxic set-points of carbohydrate metabolites are significantly altered in sima mutants and that these animals are unable to mobilize glycogen in hypoxia. Furthermore, we find that the estrogen-related receptor (dERR), which is a global regulator of aerobic glycolysis in larvae, is required for a competent hypoxic response. dERR binds to dHIFa and participates in the HIF-dependent transcriptional program in hypoxia. In addition, dERR acts in the absence of dHIFa in hypoxia and a significant portion of HIF-independent transcriptional responses can be attributed to dERR actions, including upregulation of glycolytic transcripts. These results indicate that competent hypoxic responses arise from complex interactions between HIF-dependent and -independent mechanisms, and that dERR plays a central role in both of these programs.

Indexed as

Drosophila melanogasterDrosophila ProteinsHypoxiaHypoxia-Inducible Factor 1Receptors, EstrogenAnimalsDNA-Binding ProteinsEstrogensGene Expression RegulationGlycolysisOxygenTranscriptional ActivationDNA-Binding ProteinsDrosophila ProteinsERR protein, DrosophilaEstrogensHypoxia-Inducible Factor 1OxygenReceptors, Estrogen

Identifiers

PMID23382692
PMCPMC3561118
OpenAlexW2157780671

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.