Evidence map›Paper›PMID 23382384›Full record

ArticleThe Journal of biological chemistry2013

Structural mechanism for the specific assembly and activation of the extracellular signal regulated kinase 5 (ERK5) module.

Gábor Glatz, Gergő Gógl, Anita Alexa, Attila Reményi

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Essential Oils from the Leaves, Stem, and Roots ofMolecules (Basel, Switzerland) · 2022
    Article
  5. Article
  6. The MEK5/ERK5 Pathway in Health and Disease.International journal of molecular sciences · 2021
    Review
  7. Amino Acids in Cell Signaling: Regulation and Function.Advances in experimental medicine and biology · 2021
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Structure and dynamics of the MKK7-JNK signaling complex.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Gábor GlatzDepartment of Biochemistry, Eötvös Loránd University, Budapest H-1117, Hungary.
Gergő GóglDepartment of Biochemistry, Eötvös Loránd University, Budapest H-1117, Hungary.
Anita AlexaDepartment of Biochemistry, Eötvös Loránd University, Budapest H-1117, Hungary.
Attila ReményiDepartment of Biochemistry, Eötvös Loránd University, Budapest H-1117, Hungary. Electronic address: remenyi@elte.hu.
Eötvös Loránd University · HU

Funding

Wellcome Trust 081665/Z/06/Z
6 · The paper itself

Abstract

Mitogen-activated protein kinase (MAPK) activation depends on a linear binding motif found in all MAPK kinases (MKK). In addition, the PB1 (Phox and Bem1) domain of MKK5 is required for extracellular signal regulated kinase 5 (ERK5) activation. We present the crystal structure of ERK5 in complex with an MKK5 construct comprised of the PB1 domain and the linear binding motif. We show that ERK5 has distinct protein-protein interaction surfaces compared with ERK2, which is the closest ERK5 paralog. The two MAPKs have characteristically different physiological functions and their distinct protein-protein interaction surface topography enables them to bind different sets of activators and substrates. Structural and biochemical characterization revealed that the MKK5 PB1 domain cooperates with the MAPK binding linear motif to achieve substrate specific binding, and it also enables co-recruitment of the upstream activating enzyme and the downstream substrate into one signaling competent complex. Studies on present day MAPKs and MKKs hint on the way protein kinase networks may evolve. In particular, they suggest how paralogous enzymes with similar catalytic properties could acquire novel signaling roles by merely changing the way they make physical links to other proteins.

Indexed as

Models, MolecularAmino Acid SequenceApoenzymesCatalytic DomainCrystallography, X-RayEnzyme ActivationHEK293 CellsHumansMAP Kinase Kinase 5MAP Kinase Signaling SystemMitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 7Molecular Sequence DataMultiprotein ComplexesProtein BindingProtein Interaction Domains and MotifsApoenzymesMAPK1 protein, humanMAP Kinase Kinase 5Mitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 7Multiprotein Complexes

Identifiers

PMID23382384
PMCPMC3605678
OpenAlexW2019364060

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.