Evidence map›Paper›PMID 23382083›Full record

ArticleMicrobiologyOpen2013

Identification of quorum sensing-controlled genes in Burkholderia ambifaria.

Annelise Chapalain, Ludovic Vial, Natacha Laprade, Valérie Dekimpe, Jonathan Perreault, Eric Déziel

Abstract read
In one paragraph

Article in MicrobiologyOpen, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

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  10. Evaluation of aJournal of oral microbiology · 2024
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  11. Infection and immunity · 2023
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  12. Ascochyta Blight in Chickpea: An Update.Journal of fungi (Basel, Switzerland) · 2023
    Review
  13. RNA-seq-based transcriptomic analysis of AHL-induced biofilm and pyocyanin inhibition in Pseudomonas aeruginosa by Lactobacillus brevis.International microbiology : the official journal of the Spanish Society for Microbiology · 2022
    Article
  14. Article
  15. Frontiers in microbiology · 2022
    Article
  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Annelise ChapalainINRS-Institut Armand-Frappier, 531 bd des Prairies, Laval, Quebec H7V 1B7, Canada.
Ludovic Vial
Natacha Laprade
Valérie Dekimpe
Jonathan Perreault
Eric Déziel

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

The Burkholderia cepacia complex (Bcc) comprises strains with a virulence potential toward immunocompromised patients as well as plant growth-promoting rhizobacteria (PGPR). Owing to the link between quorum sensing (QS) and virulence, most studies among Bcc species have been directed toward QS of pathogenic bacteria. We have investigated the QS of B. ambifaria, a PGPR only infrequently recovered from patients. The cepI gene, responsible for the synthesis of the main signaling molecule N-octanoylhomoserine lactone (C8 -HSL), was inactivated. Phenotypes of the B. ambifaria cepI mutant we observed, such as increased production of siderophores and decreased proteolytic and antifungal activities, are in agreement with those of other Bcc cepI mutants. The cepI mutant was then used as background strain for a whole-genome transposon-insertion mutagenesis strategy, allowing the identification of 20 QS-controlled genes, corresponding to 17 loci. The main functions identified are linked to antifungal and antimicrobial properties, as we have identified QS-controlled genes implicated in the production of pyrrolnitrin, burkholdines (occidiofungin-like molecules), and enacyloxins. This study provides insights in the QS-regulated functions of a PGPR, which could lead to beneficial potential biotechnological applications.

Indexed as

Gene Expression Regulation, BacterialAnimalsAntifungal AgentsBacterial Proteinsbeta-GalactosidaseBurkholderia cepacia complexComputational BiologyDrosophilaEscherichia coliLigasesPhenotypePyrrolnitrinQuorum SensingSiderophoresVirulenceAntifungal AgentsBacterial Proteinsbeta-GalactosidaseCepR protein, BurkholderiaLigasesN-acylhomoserine lactone synthasePyrrolnitrinSiderophores

Identifiers

PMID23382083
PMCPMC3633348

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.