Evidence map›Paper›PMID 23382076›Full record

ArticleMolecular and cellular biology2013

Repression of G1/S transcription is mediated via interaction of the GTB motifs of Nrm1 and Whi5 with Swi6.

Anna Travesa, Tatyana I Kalashnikova, Robertus A M de Bruin, Sarah Rose Cass, Charly Chahwan, David E Lee, Noel F Lowndes, Curt Wittenberg

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  4. Existence of Causation without Correlation in Transcriptional Networks.bioRxiv : the preprint server for biology · 2026
    Article
  5. A Fkh1/2 binding site array in thebioRxiv : the preprint server for biology · 2025
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Anna TravesaDepartment of Cell and Molecular Biology, The Scripps Research Institute, La Jolla, California, USA.
Tatyana I Kalashnikova
Robertus A M de Bruin
Sarah Rose Cass
Charly Chahwan
David E Lee
Noel F Lowndes
Curt Wittenberg
Scripps Research Institute · USOllscoil na Gaillimhe – University of Galway · IE

Funding

REGULATION OF G1-SPECIFIC GENE EXPRESSION IN YEASTR01GM059441 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI WITTENBERG, CURT · 2000 to 2016
$6.9M
Medical Research Council G0800297NIGMS NIH HHS R01 GM059441
6 · The paper itself

Abstract

In Saccharomyces cerevisiae, G1/S transcription factors MBF and SBF regulate a large family of genes important for entry to the cell cycle and DNA replication and repair. Their regulation is crucial for cell viability, and it is conserved throughout evolution. MBF and SBF consist of a common component, Swi6, and a DNA-specific binding protein, Mbp1 and Swi4, respectively. Transcriptional repressors bind to and regulate the activity of both transcription factors. Whi5 binds to SBF and represses its activity at the beginning of the G1 phase to prevent early activation. Nrm1 binds to MBF to repress transcription as cells progress through S phase. Here, we describe a protein motif, the GTB motif (for G1/S transcription factor binding), in Nrm1 and Whi5 that is required to bind to the transcription factors. We also identify a region of the carboxy terminus of Swi6 that is required for Nrm1 and Whi5 binding to their target transcription factors and show that mutation of this region overrides the repression of MBF- and SBF-regulated genes by Nrm1 and Whi5. Finally, we show that the GTB motif is the core of a functional module that is necessary and sufficient for targeting of the transcription factors by their cognate repressors.

Indexed as

Transcription, GeneticAmino Acid SequenceDNA-Binding ProteinsG1 PhaseGene Expression Regulation, FungalHydroxyureaPromoter Regions, GeneticProtein BindingProtein Interaction Domains and MotifsProtein Structure, TertiaryRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSchizosaccharomycesSequence AlignmentS PhaseDNA-Binding ProteinsHydroxyureaMBP1 protein, S cerevisiaeNrm1 protein, S cerevisiaeRepressor ProteinsSaccharomyces cerevisiae ProteinsSBF protein, S cerevisiaeSWI6 protein, S cerevisiaeTranscription FactorsWhi5 protein, S cerevisiae

Identifiers

PMID23382076
PMCPMC3624247
OpenAlexW2100387329

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.